Literature DB >> 18927393

A stochastic single-molecule event triggers phenotype switching of a bacterial cell.

Paul J Choi1, Long Cai, Kirsten Frieda, X Sunney Xie.   

Abstract

By monitoring fluorescently labeled lactose permease with single-molecule sensitivity, we investigated the molecular mechanism of how an Escherichia coli cell with the lac operon switches from one phenotype to another. At intermediate inducer concentrations, a population of genetically identical cells exhibits two phenotypes: induced cells with highly fluorescent membranes and uninduced cells with a small number of membrane-bound permeases. We found that this basal-level expression results from partial dissociation of the tetrameric lactose repressor from one of its operators on looped DNA. In contrast, infrequent events of complete dissociation of the repressor from DNA result in large bursts of permease expression that trigger induction of the lac operon. Hence, a stochastic single-molecule event determines a cell's phenotype.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18927393      PMCID: PMC2819113          DOI: 10.1126/science.1161427

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  25 in total

1.  Genetic regulatory mechanisms in the synthesis of proteins.

Authors:  F JACOB; J MONOD
Journal:  J Mol Biol       Date:  1961-06       Impact factor: 5.469

2.  Probing transcription factor dynamics at the single-molecule level in a living cell.

Authors:  Johan Elf; Gene-Wei Li; X Sunney Xie
Journal:  Science       Date:  2007-05-25       Impact factor: 47.728

3.  Stochastic protein expression in individual cells at the single molecule level.

Authors:  Long Cai; Nir Friedman; X Sunney Xie
Journal:  Nature       Date:  2006-03-16       Impact factor: 49.962

Review 4.  Single-molecule approach to molecular biology in living bacterial cells.

Authors:  X Sunney Xie; Paul J Choi; Gene-Wei Li; Nam Ki Lee; Giuseppe Lia
Journal:  Annu Rev Biophys       Date:  2008       Impact factor: 12.981

5.  Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells.

Authors:  A Arkin; J Ross; H H McAdams
Journal:  Genetics       Date:  1998-08       Impact factor: 4.562

6.  Direct measurement of association constants for the binding of Escherichia coli lac repressor to non-operator DNA.

Authors:  A Revzin; P H von Hippel
Journal:  Biochemistry       Date:  1977-11-01       Impact factor: 3.162

7.  Predicting stochastic gene expression dynamics in single cells.

Authors:  Jerome T Mettetal; Dale Muzzey; Juan M Pedraza; Ertugrul M Ozbudak; Alexander van Oudenaarden
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-28       Impact factor: 11.205

8.  Transcription and translation initiation frequencies of the Escherichia coli lac operon.

Authors:  D Kennell; H Riezman
Journal:  J Mol Biol       Date:  1977-07       Impact factor: 5.469

9.  The three operators of the lac operon cooperate in repression.

Authors:  S Oehler; E R Eismann; H Krämer; B Müller-Hill
Journal:  EMBO J       Date:  1990-04       Impact factor: 11.598

Review 10.  Modeling network dynamics: the lac operon, a case study.

Authors:  José M G Vilar; Călin C Guet; Stanislas Leibler
Journal:  J Cell Biol       Date:  2003-05-12       Impact factor: 10.539

View more
  172 in total

1.  Reconciling molecular regulatory mechanisms with noise patterns of bacterial metabolic promoters in induced and repressed states.

Authors:  Matthew L Ferguson; Dominique Le Coq; Matthieu Jules; Stéphane Aymerich; Ovidiu Radulescu; Nathalie Declerck; Catherine A Royer
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-21       Impact factor: 11.205

2.  Microbial scout hypothesis, stochastic exit from dormancy, and the nature of slow growers.

Authors:  S Buerger; A Spoering; E Gavrish; C Leslin; L Ling; S S Epstein
Journal:  Appl Environ Microbiol       Date:  2012-02-24       Impact factor: 4.792

3.  Landscape and global stability of nonadiabatic and adiabatic oscillations in a gene network.

Authors:  Haidong Feng; Bo Han; Jin Wang
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

4.  Stochastic expression dynamics of a transcription factor revealed by single-molecule noise analysis.

Authors:  Zach Hensel; Haidong Feng; Bo Han; Christine Hatem; Jin Wang; Jie Xiao
Journal:  Nat Struct Mol Biol       Date:  2012-07-01       Impact factor: 15.369

Review 5.  Classic and contemporary approaches to modeling biochemical reactions.

Authors:  William W Chen; Mario Niepel; Peter K Sorger
Journal:  Genes Dev       Date:  2010-09-01       Impact factor: 11.361

Review 6.  The role of physiological heterogeneity in microbial population behavior.

Authors:  Mary E Lidstrom; Michael C Konopka
Journal:  Nat Chem Biol       Date:  2010-09-17       Impact factor: 15.040

7.  Measurement of the copy number of the master quorum-sensing regulator of a bacterial cell.

Authors:  Shu-Wen Teng; Yufang Wang; Kimberly C Tu; Tao Long; Pankaj Mehta; Ned S Wingreen; Bonnie L Bassler; N P Ong
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

Review 8.  Modeling bistable cell-fate choices in the Drosophila eye: qualitative and quantitative perspectives.

Authors:  Thomas G W Graham; S M Ali Tabei; Aaron R Dinner; Ilaria Rebay
Journal:  Development       Date:  2010-07       Impact factor: 6.868

9.  Biological role of noise encoded in a genetic network motif.

Authors:  Mark Kittisopikul; Gürol M Süel
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-28       Impact factor: 11.205

10.  DNA-Binding Kinetics Determines the Mechanism of Noise-Induced Switching in Gene Networks.

Authors:  Margaret J Tse; Brian K Chu; Mahua Roy; Elizabeth L Read
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.