Literature DB >> 18854140

Probing intrinsic properties of a robust morphogen gradient in Drosophila.

Feng He1, Ying Wen, Jingyuan Deng, Xiaodong Lin, Long Jason Lu, Renjie Jiao, Jun Ma.   

Abstract

A remarkable feature of development is its reproducibility, the ability to correct embryo-to-embryo variations and instruct precise patterning. In Drosophila, embryonic patterning along the anterior-posterior axis is controlled by the morphogen gradient Bicoid (Bcd). In this article, we describe quantitative studies of the native Bcd gradient and its target Hunchback (Hb). We show that the native Bcd gradient is highly reproducible and is itself scaled with embryo length. While a precise Bcd gradient is necessary for precise Hb expression, it still has positional errors greater than Hb expression. We describe analyses further probing mechanisms for Bcd gradient scaling and correction of its residual positional errors. Our results suggest a simple model of a robust Bcd gradient sufficient to achieve scaled and precise activation of its targets. The robustness of this gradient is conferred by its intrinsic properties of "self-correcting" the inevitable input variations to achieve a precise and reproducible output.

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Year:  2008        PMID: 18854140      PMCID: PMC2629455          DOI: 10.1016/j.devcel.2008.09.004

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  37 in total

1.  Cooperative DNA-binding by Bicoid provides a mechanism for threshold-dependent gene activation in the Drosophila embryo.

Authors:  D S Burz; R Rivera-Pomar; H Jäckle; S D Hanes
Journal:  EMBO J       Date:  1998-10-15       Impact factor: 11.598

2.  Modulation of promoter occupancy by cooperative DNA binding and activation-domain function is a major determinant of transcriptional regulation by activators in vivo.

Authors:  M Tanaka
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-30       Impact factor: 11.205

3.  Model for the robust establishment of precise proportions in the early Drosophila embryo.

Authors:  Tinri Aegerter-Wilmsen; Christof M Aegerter; Ton Bisseling
Journal:  J Theor Biol       Date:  2005-01-01       Impact factor: 2.691

4.  A gradient of bicoid protein in Drosophila embryos.

Authors:  W Driever; C Nüsslein-Volhard
Journal:  Cell       Date:  1988-07-01       Impact factor: 41.582

5.  The bicoid protein is a positive regulator of hunchback transcription in the early Drosophila embryo.

Authors:  W Driever; C Nüsslein-Volhard
Journal:  Nature       Date:  1989-01-12       Impact factor: 49.962

6.  The gradient morphogen bicoid is a concentration-dependent transcriptional activator.

Authors:  G Struhl; K Struhl; P M Macdonald
Journal:  Cell       Date:  1989-06-30       Impact factor: 41.582

7.  The Drosophila morphogenetic protein Bicoid binds DNA cooperatively.

Authors:  X Ma; D Yuan; K Diepold; T Scarborough; J Ma
Journal:  Development       Date:  1996-04       Impact factor: 6.868

8.  Synergy between the hunchback and bicoid morphogens is required for anterior patterning in Drosophila.

Authors:  M Simpson-Brose; J Treisman; C Desplan
Journal:  Cell       Date:  1994-09-09       Impact factor: 41.582

9.  Rapid preparation of a panel of polyclonal antibodies to Drosophila segmentation proteins.

Authors:  D Kosman; S Small; J Reinitz
Journal:  Dev Genes Evol       Date:  1998-07       Impact factor: 0.900

10.  bicoid mRNA localization signal: phylogenetic conservation of function and RNA secondary structure.

Authors:  P M MacDonald
Journal:  Development       Date:  1990-09       Impact factor: 6.868

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  48 in total

Review 1.  Transcriptional activators and activation mechanisms.

Authors:  Jun Ma
Journal:  Protein Cell       Date:  2011-12-17       Impact factor: 14.870

2.  Coding design of positional information for robust morphogenesis.

Authors:  Yoshihiro Morishita; Yoh Iwasa
Journal:  Biophys J       Date:  2011-11-15       Impact factor: 4.033

3.  A computational statistics approach for estimating the spatial range of morphogen gradients.

Authors:  Jitendra S Kanodia; Yoosik Kim; Raju Tomer; Zia Khan; Kwanghun Chung; John D Storey; Hang Lu; Philipp J Keller; Stanislav Y Shvartsman
Journal:  Development       Date:  2011-10-17       Impact factor: 6.868

4.  Shaping a morphogen gradient for positional precision.

Authors:  Feng He; Timothy E Saunders; Ying Wen; David Cheung; Renjie Jiao; Pieter Rein ten Wolde; Martin Howard; Jun Ma
Journal:  Biophys J       Date:  2010-08-04       Impact factor: 4.033

Review 5.  Modelling the Bicoid gradient.

Authors:  Oliver Grimm; Mathieu Coppey; Eric Wieschaus
Journal:  Development       Date:  2010-07       Impact factor: 6.868

6.  Evaluating the Drosophila Bicoid morphogen gradient system through dissecting the noise in transcriptional bursts.

Authors:  Feng He; Jie Ren; Wei Wang; Jun Ma
Journal:  Bioinformatics       Date:  2012-02-02       Impact factor: 6.937

Review 7.  Intracellular Scaling Mechanisms.

Authors:  Simone Reber; Nathan W Goehring
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-08-07       Impact factor: 10.005

8.  Adaptation of the length scale and amplitude of the Bicoid gradient profile to achieve robust patterning in abnormally large Drosophila melanogaster embryos.

Authors:  David Cheung; Cecelia Miles; Martin Kreitman; Jun Ma
Journal:  Development       Date:  2013-11-27       Impact factor: 6.868

9.  Anterior-posterior positional information in the absence of a strong Bicoid gradient.

Authors:  Amanda Ochoa-Espinosa; Danyang Yu; Aristotelis Tsirigos; Paolo Struffi; Stephen Small
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-23       Impact factor: 11.205

10.  Getting the measure of positional information.

Authors:  Johannes Jaeger; Alfonso Martinez-Arias
Journal:  PLoS Biol       Date:  2009-03-31       Impact factor: 8.029

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