Literature DB >> 18836497

Toward a more complete view of tRNA biology.

Richard Giegé1.   

Abstract

Transfer RNAs are ancient molecules present in all domains of life. In addition to translating the genetic code into protein and defining the second genetic code together with aminoacyl-tRNA synthetases, tRNAs act in many other cellular functions. Robust phenomenological observations on the role of tRNAs in translation, together with massive sequence and crystallographic data, have led to a deeper physicochemical understanding of tRNA architecture, dynamics and identity. In vitro studies complemented by cell biology data already indicate how tRNA behaves in cellular environments, in particular in higher Eukarya. From an opposite approach, reverse evolution considerations suggest how tRNAs emerged as simplified structures from the RNA world. This perspective discusses what basic questions remain unanswered, how these answers can be obtained and how a more rational understanding of the function and dysfunction of tRNA can have applications in medicine and biotechnology.

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Year:  2008        PMID: 18836497     DOI: 10.1038/nsmb.1498

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  51 in total

1.  Biocrystallography: past, present, future.

Authors:  Richard Giegé; Claude Sauter
Journal:  HFSP J       Date:  2010-04-22

Review 2.  Slicing tRNAs to boost functional ncRNA diversity.

Authors:  Jennifer Gebetsberger; Norbert Polacek
Journal:  RNA Biol       Date:  2013-11-21       Impact factor: 4.652

3.  A novel class of small RNAs: tRNA-derived RNA fragments (tRFs).

Authors:  Yong Sun Lee; Yoshiyuki Shibata; Ankit Malhotra; Anindya Dutta
Journal:  Genes Dev       Date:  2009-11-15       Impact factor: 11.361

Review 4.  Noncoding RNAs in smooth muscle cell homeostasis: implications in phenotypic switch and vascular disorders.

Authors:  N Coll-Bonfill; B de la Cruz-Thea; M V Pisano; M M Musri
Journal:  Pflugers Arch       Date:  2016-04-25       Impact factor: 3.657

Review 5.  Emerging roles of tRNA in adaptive translation, signalling dynamics and disease.

Authors:  Sebastian Kirchner; Zoya Ignatova
Journal:  Nat Rev Genet       Date:  2014-12-23       Impact factor: 53.242

6.  Deep sequencing of small non-coding RNA highlights brain-specific expression patterns and RNA cleavage.

Authors:  Fiete Haack; Nares Trakooljul; Kevin Gley; Eduard Murani; Frieder Hadlich; Klaus Wimmers; Siriluck Ponsuksili
Journal:  RNA Biol       Date:  2019-08-29       Impact factor: 4.652

7.  Biophysical analysis of Arabidopsis protein-only RNase P alone and in complex with tRNA provides a refined model of tRNA binding.

Authors:  Franziska Pinker; Cédric Schelcher; Pablo Fernandez-Millan; Anthony Gobert; Catherine Birck; Aurélien Thureau; Pierre Roblin; Philippe Giegé; Claude Sauter
Journal:  J Biol Chem       Date:  2017-07-10       Impact factor: 5.157

8.  Orthogonal use of a human tRNA synthetase active site to achieve multifunctionality.

Authors:  Quansheng Zhou; Mili Kapoor; Min Guo; Rajesh Belani; Xiaoling Xu; William B Kiosses; Melanie Hanan; Chulho Park; Eva Armour; Minh-Ha Do; Leslie A Nangle; Paul Schimmel; Xiang-Lei Yang
Journal:  Nat Struct Mol Biol       Date:  2009-12-13       Impact factor: 15.369

9.  Plasmodial aspartyl-tRNA synthetases and peculiarities in Plasmodium falciparum.

Authors:  Tania Bour; Aziza Akaddar; Bernard Lorber; Sébastien Blais; Christian Balg; Ermanno Candolfi; Magali Frugier
Journal:  J Biol Chem       Date:  2009-05-14       Impact factor: 5.157

10.  Tertiary network in mammalian mitochondrial tRNAAsp revealed by solution probing and phylogeny.

Authors:  Marie Messmer; Joern Pütz; Takeo Suzuki; Tsutomu Suzuki; Claude Sauter; Marie Sissler; Florentz Catherine
Journal:  Nucleic Acids Res       Date:  2009-09-18       Impact factor: 16.971

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