Literature DB >> 18721812

Signal discrimination by differential regulation of protein stability in quorum sensing.

Cameron Smith1, Hao Song, Lingchong You.   

Abstract

Quorum sensing (QS) is a communication mechanism exploited by a large variety of bacteria to coordinate gene expression at the population level. In Gram-negative bacteria, QS occurs via synthesis and detection of small chemical signals, most of which belong to the acyl-homoserine lactone class. In such a system, binding of an acyl-homoserine lactone signal to its cognate transcriptional regulator (R-protein) often induces stabilization and subsequent dimerization of the R-protein, which results in the regulation of downstream gene expression. Existence of diverse QS systems within and among species of bacteria indicates that each bacterium needs to distinguish among a myriad of structurally similar chemical signals. We show, using a mathematical model, that fast degradation of an R-protein monomer can facilitate discrimination of signals that differentially stabilize it. Furthermore, our results suggest an inverse correlation between the stability of an R-protein and the achievable limits of fidelity in signal discrimination. In particular, an unstable R-protein tends to be more specific to its cognate signal, whereas a stable R-protein tends to be more promiscuous. These predictions are consistent with experimental data on well-studied natural and engineered R-proteins and thus have implications for understanding the functional design of QS systems.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18721812      PMCID: PMC2573026          DOI: 10.1016/j.jmb.2008.08.009

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  43 in total

1.  Detection of other microbial species by Salmonella: expression of the SdiA regulon.

Authors:  Jenée N Smith; Brian M M Ahmer
Journal:  J Bacteriol       Date:  2003-02       Impact factor: 3.490

2.  Kinetic amplification of enzyme discrimination.

Authors:  J Ninio
Journal:  Biochimie       Date:  1975       Impact factor: 4.079

3.  Programmable cells: interfacing natural and engineered gene networks.

Authors:  Hideki Kobayashi; Mads Kaern; Michihiro Araki; Kristy Chung; Timothy S Gardner; Charles R Cantor; James J Collins
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-24       Impact factor: 11.205

Review 4.  Quorum sensing and bacterial cross-talk in biotechnology.

Authors:  John C March; William E Bentley
Journal:  Curr Opin Biotechnol       Date:  2004-10       Impact factor: 9.740

5.  Kinetic proofreading: a new mechanism for reducing errors in biosynthetic processes requiring high specificity.

Authors:  J J Hopfield
Journal:  Proc Natl Acad Sci U S A       Date:  1974-10       Impact factor: 11.205

6.  Site-directed mutagenesis of a LuxR-type quorum-sensing transcription factor: alteration of autoinducer specificity.

Authors:  Yunrong Chai; Stephen C Winans
Journal:  Mol Microbiol       Date:  2004-02       Impact factor: 3.501

7.  Reversible acyl-homoserine lactone binding to purified Vibrio fischeri LuxR protein.

Authors:  M L Urbanowski; C P Lostroh; E P Greenberg
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

8.  The evolutionary history of quorum-sensing systems in bacteria.

Authors:  Emmanuelle Lerat; Nancy A Moran
Journal:  Mol Biol Evol       Date:  2004-03-10       Impact factor: 16.240

9.  Mechanism of Pseudomonas aeruginosa RhlR transcriptional regulation of the rhlAB promoter.

Authors:  Gerardo Medina; Katy Juárez; Brenda Valderrama; Gloria Soberón-Chávez
Journal:  J Bacteriol       Date:  2003-10       Impact factor: 3.490

10.  Noise reduction by diffusional dissipation in a minimal quorum sensing motif.

Authors:  Yu Tanouchi; Dennis Tu; Jungsang Kim; Lingchong You
Journal:  PLoS Comput Biol       Date:  2008-08-29       Impact factor: 4.475

View more
  8 in total

1.  Chemical Control of Quorum Sensing in E. coli: Identification of Small Molecule Modulators of SdiA and Mechanistic Characterization of a Covalent Inhibitor.

Authors:  Matthew J Styles; Stephen A Early; Trisha Tucholski; Korbin H J West; Ying Ge; Helen E Blackwell
Journal:  ACS Infect Dis       Date:  2020-10-30       Impact factor: 5.084

2.  A modular positive feedback-based gene amplifier.

Authors:  Goutam J Nistala; Kang Wu; Christopher V Rao; Kaustubh D Bhalerao
Journal:  J Biol Eng       Date:  2010-02-26       Impact factor: 4.355

Review 3.  Engineering multicellular systems by cell-cell communication.

Authors:  Anand Pai; Yu Tanouchi; Cynthia H Collins; Lingchong You
Journal:  Curr Opin Biotechnol       Date:  2009-09-03       Impact factor: 9.740

4.  Stochastic simulations of a synthetic bacteria-yeast ecosystem.

Authors:  Konstantinos Biliouris; David Babson; Claudia Schmidt-Dannert; Yiannis N Kaznessis
Journal:  BMC Syst Biol       Date:  2012-06-06

5.  Engineering microbes to sense and eradicate Pseudomonas aeruginosa, a human pathogen.

Authors:  Nazanin Saeidi; Choon Kit Wong; Tat-Ming Lo; Hung Xuan Nguyen; Hua Ling; Susanna Su Jan Leong; Chueh Loo Poh; Matthew Wook Chang
Journal:  Mol Syst Biol       Date:  2011-08-16       Impact factor: 11.429

6.  Bacteria Floc, but Do They Flock? Insights from Population Interaction Models of Quorum Sensing.

Authors:  Hana Ueda; Kristina Stephens; Konstantina Trivisa; William E Bentley
Journal:  mBio       Date:  2019-05-28       Impact factor: 7.867

Review 7.  Synthetic Biology Approaches in The Development of Engineered Therapeutic Microbes.

Authors:  Minjeong Kang; Donghui Choe; Kangsan Kim; Byung-Kwan Cho; Suhyung Cho
Journal:  Int J Mol Sci       Date:  2020-11-19       Impact factor: 5.923

8.  Attenuation of Pseudomonas aeruginosa Quorum Sensing by Natural Products: Virtual Screening, Evaluation and Biomolecular Interactions.

Authors:  Lin Zhong; Vinothkannan Ravichandran; Na Zhang; Hailong Wang; Xiaoying Bian; Youming Zhang; Aiying Li
Journal:  Int J Mol Sci       Date:  2020-03-22       Impact factor: 5.923

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.