Literature DB >> 18678947

Crystallization and preliminary crystallographic analysis of tRNA (m(7)G46) methyltransferase from Escherichia coli.

Qi Liu1, Yang Gao, Weili Yang, Huihao Zhou, Yongxiang Gao, Xiao Zhang, Maikun Teng, Liwen Niu.   

Abstract

Transfer RNA (tRNA) (m(7)G46) methyltransferase (TrmB) belongs to the Rossmann-fold methyltransferase (RFM) family and uses S-adenosyl-L-methionine (SAM) as the methyl-group donor to catalyze the formation of N(7)-methylguanosine (m(7)G) at position 46 in the variable loop of tRNAs. After attempts to crystallize full-length Escherichia coli TrmB (EcTrmB) failed, a truncated protein lacking the first 32 residues of the N-terminus but with an additional His(6) tag at the C-terminus was crystallized by the hanging-drop vapour-diffusion method using polyethylene glycol 3350 (PEG 3350) as precipitant at 283 K. An X-ray diffraction data set was collected using a single flash-cooled crystal that belonged to space group P2(1).

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18678947      PMCID: PMC2494960          DOI: 10.1107/S1744309108020241

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  12 in total

Review 1.  Transfer RNA modification: influence on translational frameshifting and metabolism.

Authors:  G R Björk; J M Durand; T G Hagervall; R Leipuviene; H K Lundgren; K Nilsson; P Chen; Q Qian; J Urbonavicius
Journal:  FEBS Lett       Date:  1999-06-04       Impact factor: 4.124

2.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

3.  Structure of the yeast tRNA m7G methylation complex.

Authors:  Nicolas Leulliot; Maxime Chaillet; Dominique Durand; Nathalie Ulryck; Karine Blondeau; Herman van Tilbeurgh
Journal:  Structure       Date:  2008-01       Impact factor: 5.006

4.  tRNA m7G methyltransferase Trm8p/Trm82p: evidence linking activity to a growth phenotype and implicating Trm82p in maintaining levels of active Trm8p.

Authors:  Andrei Alexandrov; Elizabeth J Grayhack; Eric M Phizicky
Journal:  RNA       Date:  2005-04-05       Impact factor: 4.942

5.  The RNA Modification Database: 1999 update.

Authors:  J Rozenski; P F Crain; J A McCloskey
Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

6.  The RNA modification database--1998.

Authors:  J A McCloskey; P F Crain
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

7.  Two proteins that form a complex are required for 7-methylguanosine modification of yeast tRNA.

Authors:  Andrei Alexandrov; Mark R Martzen; Eric M Phizicky
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

8.  The yggH gene of Escherichia coli encodes a tRNA (m7G46) methyltransferase.

Authors:  Lara G S De Bie; Martine Roovers; Yamina Oudjama; Ruddy Wattiez; Catherine Tricot; Victor Stalon; Louis Droogmans; Janusz M Bujnicki
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

9.  Hetero subunit interaction and RNA recognition of yeast tRNA (m7G46) methyltransferase synthesized in a wheat germ cell-free translation system.

Authors:  Yuki Muneyoshi; Keisuke Matsumoto; Chie Tomikawa; Takashi Toyooka; Anna Ochi; Takashi Masaoka; Yaeta Endo; Hiroyuki Hori
Journal:  Nucleic Acids Symp Ser (Oxf)       Date:  2007

10.  Crystal structure of Bacillus subtilis TrmB, the tRNA (m7G46) methyltransferase.

Authors:  Ingrid Zegers; Daniel Gigot; Françoise van Vliet; Catherine Tricot; Stéphane Aymerich; Janusz M Bujnicki; Jan Kosinski; Louis Droogmans
Journal:  Nucleic Acids Res       Date:  2006-04-05       Impact factor: 16.971

View more
  1 in total

1.  Structural model of the M7G46 Methyltransferase TrmB in complex with tRNA.

Authors:  Katharina F Blersch; Jan-Philipp Burchert; Sophie-Charlotte August; Luisa Welp; Piotr Neumann; Sarah Köster; Henning Urlaub; Ralf Ficner
Journal:  RNA Biol       Date:  2021-05-19       Impact factor: 4.652

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.