Literature DB >> 15681871

Molecular determinants of substrate specificity in the feruloyl esterase module of xylanase 10B from Clostridium thermocellum.

Nicolas Tarbouriech1, José A M Prates, Carlos M G A Fontes, Gideon J Davies.   

Abstract

Feruloyl esterases play a key role in the degradation of the intricate structure of the plant cell wall by hydrolysing the ferulate ester groups involved in the cross-linking between hemicelluloses and between hemicellulose and lignin. The structure of the feruloyl esterase module of Clostridium thermocellum cellulosomal xylanase 10B has been reported previously. It displays the alpha/beta hydrolase fold with a classical Ser-His-Asp catalytic triad. Here, the structures of a Ser-Ala mutant of this feruloyl esterase in complexes with methyl syringate, methyl sinapinate and methyl vanillate are described. Substrate binding is accompanied by subtle conformational changes at amino acids Trp982, Met955, Asn1023 and Ile1019 in the ligand-binding cavity. The structural determinants, particularly the m-methoxy substituent, governing the substrate specificity of Xyn10B feruloyl esterase are rationalized.

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Year:  2005        PMID: 15681871     DOI: 10.1107/S0907444904029695

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  3 in total

1.  Purification, crystallization and crystallographic analysis of Clostridium thermocellum endo-1,4-beta-D-xylanase 10B in complex with xylohexaose.

Authors:  Shabir Najmudin; Benedita A Pinheiro; Maria J Romão; José A M Prates; Carlos M G A Fontes
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-07-05

2.  MxCuBE: a synchrotron beamline control environment customized for macromolecular crystallography experiments.

Authors:  José Gabadinho; Antonia Beteva; Matias Guijarro; Vicente Rey-Bakaikoa; Darren Spruce; Matthew W Bowler; Sandor Brockhauser; David Flot; Elspeth J Gordon; David R Hall; Bernard Lavault; Andrew A McCarthy; Joanne McCarthy; Edward Mitchell; Stéphanie Monaco; Christoph Mueller-Dieckmann; Didier Nurizzo; Raimond B G Ravelli; Xavier Thibault; Martin A Walsh; Gordon A Leonard; Sean M McSweeney
Journal:  J Synchrotron Radiat       Date:  2010-07-13       Impact factor: 2.616

3.  Inter-conversion of catalytic abilities in a bifunctional carboxyl/feruloyl-esterase from earthworm gut metagenome.

Authors:  José María Vieites; Azam Ghazi; Ana Beloqui; Julio Polaina; José M Andreu; Olga V Golyshina; Taras Y Nechitaylo; Agnes Waliczek; Michail M Yakimov; Peter N Golyshin; Manuel Ferrer
Journal:  Microb Biotechnol       Date:  2009-07-17       Impact factor: 5.813

  3 in total

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