Literature DB >> 18662039

Transverse tunneling through DNA hydrogen bonded to an electrode.

Jin He1, Lisha Lin, Peiming Zhang, Quinn Spadola, Zhiqun Xi, Qiang Fu, Stuart Lindsay.   

Abstract

Guanidinium ions tethered to an electrode form electrical contacts to DNA via hydrogen bonding with the backbone phosphates, thus providing a sequence-independent electrical connector for native DNA submerged in an aqueous electrolyte. DNA adlayers on a guanidinium modified electrode can be imaged by scanning tunneling microscopy with tens of pS gap conductance. The image resolution suggests that multiatom contacts contribute to the tunnel conductance, so we estimate that the single-nucleotide pair conductance may be on the order of 1 pS.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18662039      PMCID: PMC2575003          DOI: 10.1021/nl801646y

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  14 in total

1.  Charge migration in DNA: ion-gated transport.

Authors:  R N Barnett; C L Cleveland; A Joy; U Landman; G B Schuster
Journal:  Science       Date:  2001-10-19       Impact factor: 47.728

2.  Reproducible measurement of single-molecule conductivity.

Authors:  X D Cui; A Primak; X Zarate; J Tomfohr; O F Sankey; A L Moore; T A Moore; D Gust; G Harris; S M Lindsay
Journal:  Science       Date:  2001-10-19       Impact factor: 47.728

Review 3.  Noncovalent binding between guanidinium and anionic groups: focus on biological- and synthetic-based arginine/guanidinium interactions with phosph[on]ate and sulf[on]ate residues.

Authors:  Kevin A Schug; Wolfgang Lindner
Journal:  Chem Rev       Date:  2005-01       Impact factor: 60.622

4.  Electronic signature of DNA nucleotides via transverse transport.

Authors:  Michael Zwolak; Massimiliano Di Ventra
Journal:  Nano Lett       Date:  2005-03       Impact factor: 11.189

5.  Electronic structure of single DNA molecules resolved by transverse scanning tunnelling spectroscopy.

Authors:  Errez Shapir; Hezy Cohen; Arrigo Calzolari; Carlo Cavazzoni; Dmitry A Ryndyk; Gianaurelio Cuniberti; Alexander Kotlyar; Rosa Di Felice; Danny Porath
Journal:  Nat Mater       Date:  2007-11-25       Impact factor: 43.841

Review 6.  DNA condensation by multivalent cations.

Authors:  V A Bloomfield
Journal:  Biopolymers       Date:  1997       Impact factor: 2.505

7.  Images of the DNA double helix in water.

Authors:  S M Lindsay; T Thundat; L Nagahara; U Knipping; R L Rill
Journal:  Science       Date:  1989-06-02       Impact factor: 47.728

8.  Direct observation of native DNA structures with the scanning tunneling microscope.

Authors:  T P Beebe; T E Wilson; D F Ogletree; J E Katz; R Balhorn; M B Salmeron; W J Siekhaus
Journal:  Science       Date:  1989-01-20       Impact factor: 47.728

9.  Aryl phosphate complexation by cationic cyclodextrins. An enthalpic advantage for guanidinium over ammonium and unusual enthalpy-entropy compensation.

Authors:  S L Hauser; E W Johanson; H P Green; P J Smith
Journal:  Org Lett       Date:  2000-11-16       Impact factor: 6.005

10.  Force spectroscopy of the double-tethered concanavalin-A mannose bond.

Authors:  Timothy V Ratto; Kevin C Langry; Robert E Rudd; Rodney L Balhorn; Michael J Allen; Michael W McElfresh
Journal:  Biophys J       Date:  2004-04       Impact factor: 4.033

View more
  6 in total

1.  Chemical recognition and binding kinetics in a functionalized tunnel junction.

Authors:  Shuai Chang; Shuo Huang; Hao Liu; Peiming Zhang; Feng Liang; Rena Akahori; Shengqin Li; Brett Gyarfas; John Shumway; Brian Ashcroft; Jin He; Stuart Lindsay
Journal:  Nanotechnology       Date:  2012-06-15       Impact factor: 3.874

2.  Fabrication and characterization of nanopores with insulated transverse nanoelectrodes for DNA sensing in salt solution.

Authors:  Ken Healy; Vishva Ray; Lauren J Willis; Neil Peterman; John Bartel; Marija Drndić
Journal:  Electrophoresis       Date:  2012-12       Impact factor: 3.535

3.  Synthesis and EPR studies of 2'-deoxyuridines with alkynyl, rodlike linkages.

Authors:  Adam Sniady; Michael D Sevilla; Srinivasarao Meneni; Tadeusz Lis; Slawomir Szafert; Deepthi Khanduri; John M Finke; Roman Dembinski
Journal:  Chemistry       Date:  2009-08-03       Impact factor: 5.236

4.  Insights into electron tunneling across hydrogen-bonded base-pairs in complete molecular circuits for single-stranded DNA sequencing.

Authors:  Myeong H Lee; Otto F Sankey
Journal:  J Phys Condens Matter       Date:  2009-01-21       Impact factor: 2.333

5.  A hydrogen-bonded electron-tunneling circuit reads the base composition of unmodified DNA.

Authors:  Jin He; Lisha Lin; Hao Liu; Peiming Zhang; Myeong Lee; O F Sankey; S M Lindsay
Journal:  Nanotechnology       Date:  2009-01-23       Impact factor: 3.874

6.  DNA/RNA transverse current sequencing: intrinsic structural noise from neighboring bases.

Authors:  Jose R Alvarez; Dmitry Skachkov; Steven E Massey; Alan Kalitsov; Julian P Velev
Journal:  Front Genet       Date:  2015-06-19       Impact factor: 4.599

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.