Literature DB >> 18642904

Spectroscopic and crystallographic characterization of a tetrameric hemoglobin oxidation reveals structural features of the functional intermediate relaxed/tense state.

Luigi Vitagliano1, Alessandro Vergara, Giovanna Bonomi, Antonello Merlino, Cinzia Verde, Guido di Prisco, Barry D Howes, Giulietta Smulevich, Lelio Mazzarella.   

Abstract

Tetrameric hemoglobins represent the most commonly used model for the description of the basic concepts of protein allostery. The classical stereochemical model assumes a concerted transition of the protein, upon oxygen release, from the relaxed (R) to the tense (T) state. Despite the large amount of data accumulated on the end-points of the transition, scarce structural information is available on the intermediate species along the pathway. Here we report a spectroscopic characterization of the autoxidation process of the Trematomus newnesi major Hb component and the atomic resolution structure (1.25 A) of an intermediate form along the pathway characterized by a different binding and oxidation state of the alpha and beta chains. In contrast to the alpha-heme iron, which binds a CO molecule, the beta iron displays a pentacoordinated oxidized state, which is rare in tetrameric hemoglobins. Interestingly, the information provided by the present analysis is not limited to the characterization of the peculiar oxidation process of Antarctic fish hemoglobins. Indeed, this structure represents the most detailed snapshot of hemoglobin allosteric transition hitherto achieved. Upon ligand release at the beta heme, a cascade of structural events is observed. Notably, several structural features of the tertiary structure of the alpha and beta chains closely resemble those typically observed in the deoxygenated state. The overall quaternary structure also becomes intermediate between the R and the T state. The analysis of the alterations induced by the ligand release provides a clear picture of the temporal sequence of the events associated with the transition. The implications of the present findings have also been discussed in the wider context of tetrameric Hbs.

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Year:  2008        PMID: 18642904     DOI: 10.1021/ja803363p

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

1.  Crystallization, preliminary X-ray diffraction studies and Raman microscopy of the major haemoglobin from the sub-Antarctic fish Eleginops maclovinus in the carbomonoxy form.

Authors:  Antonello Merlino; Luigi Vitagliano; Anna Balsamo; Francesco P Nicoletti; Barry D Howes; Daniela Giordano; Daniela Coppola; Guido di Prisco; Cinzia Verde; Giulietta Smulevich; Lelio Mazzarella; Alessandro Vergara
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-10-29

2.  An order-disorder transition plays a role in switching off the root effect in fish hemoglobins.

Authors:  Alessandro Vergara; Luigi Vitagliano; Antonello Merlino; Filomena Sica; Katia Marino; Cinzia Verde; Guido di Prisco; Lelio Mazzarella
Journal:  J Biol Chem       Date:  2010-07-07       Impact factor: 5.157

Review 3.  Nitric Oxide Production and Regulation in the Teleost Cardiovascular System.

Authors:  Daniela Giordano; Cinzia Verde; Paola Corti
Journal:  Antioxidants (Basel)       Date:  2022-05-12

4.  Linking conformation change to hemoglobin activation via chain-selective time-resolved resonance Raman spectroscopy of protoheme/mesoheme hybrids.

Authors:  Gurusamy Balakrishnan; Mohammed Ibrahim; Piotr J Mak; Jessica Hata; James R Kincaid; Thomas G Spiro
Journal:  J Biol Inorg Chem       Date:  2009-03-14       Impact factor: 3.358

5.  Correlation between hemichrome stability and the root effect in tetrameric hemoglobins.

Authors:  Alessandro Vergara; Marisa Franzese; Antonello Merlino; Giovanna Bonomi; Cinzia Verde; Daniela Giordano; Guido di Prisco; H Caroline Lee; Jack Peisach; Lelio Mazzarella
Journal:  Biophys J       Date:  2009-08-05       Impact factor: 4.033

6.  The crystal structure of haemoglobin from Atlantic cod.

Authors:  Ronny Helland; Eva Katrin Bjørkeng; Ulli Rothweiler; Magne Olav Sydnes; Daniela Maria Pampanin
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2019-07-16       Impact factor: 1.056

7.  Quaternary Structure Transitions of Human Hemoglobin: An Atomic-Level View of the Functional Intermediate States.

Authors:  Nicole Balasco; Josephine Alba; Marco D'Abramo; Luigi Vitagliano
Journal:  J Chem Inf Model       Date:  2021-08-10       Impact factor: 6.162

8.  Atomic-Level View of the Functional Transition in Vertebrate Hemoglobins: The Case of Antarctic Fish Hbs.

Authors:  Nicole Balasco; Antonella Paladino; Giuseppe Graziano; Marco D'Abramo; Luigi Vitagliano
Journal:  J Chem Inf Model       Date:  2022-08-05       Impact factor: 6.162

9.  Biophysical characterisation of neuroglobin of the icefish, a natural knockout for hemoglobin and myoglobin. Comparison with human neuroglobin.

Authors:  Daniela Giordano; Ignacio Boron; Stefania Abbruzzetti; Wendy Van Leuven; Francesco P Nicoletti; Flavio Forti; Stefano Bruno; C-H Christina Cheng; Luc Moens; Guido di Prisco; Alejandro D Nadra; Darío Estrin; Giulietta Smulevich; Sylvia Dewilde; Cristiano Viappiani; Cinzia Verde
Journal:  PLoS One       Date:  2012-12-03       Impact factor: 3.240

10.  The unique structural features of carbonmonoxy hemoglobin from the sub-Antarctic fish Eleginops maclovinus.

Authors:  Nicole Balasco; Luigi Vitagliano; Antonello Merlino; Cinzia Verde; Lelio Mazzarella; Alessandro Vergara
Journal:  Sci Rep       Date:  2019-12-12       Impact factor: 4.379

  10 in total

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