Literature DB >> 19651045

Correlation between hemichrome stability and the root effect in tetrameric hemoglobins.

Alessandro Vergara1, Marisa Franzese, Antonello Merlino, Giovanna Bonomi, Cinzia Verde, Daniela Giordano, Guido di Prisco, H Caroline Lee, Jack Peisach, Lelio Mazzarella.   

Abstract

Oxidation of Hbs leads to the formation of different forms of Fe(III) that are relevant to a range of biochemical and physiological functions. Here we report a combined EPR/x-ray crystallography study performed at acidic pH on six ferric tetrameric Hbs. Five of the Hbs were isolated from the high-Antarctic notothenioid fishes Trematomus bernacchii, Trematomus newnesi, and Gymnodraco acuticeps, and one was isolated from the sub-Antarctic notothenioid Cottoperca gobio. Our EPR analysis reveals that 1), in all of these Hbs, at acidic pH the aquomet form and two hemichromes coexist; and 2), only in the three Hbs that exhibit the Root effect is a significant amount of the pentacoordinate (5C) high-spin Fe(III) form found. The crystal structure at acidic pH of the ferric form of the Root-effect Hb from T. bernacchii is also reported at 1.7 A resolution. This structure reveals a 5C state of the heme iron for both the alpha- and beta-chains within a T quaternary structure. Altogether, the spectroscopic and crystallographic results indicate that the Root effect and hemichrome stability at acidic pH are correlated in tetrameric Hbs. Furthermore, Antarctic fish Hbs exhibit higher peroxidase activity than mammalian and temperate fish Hbs, suggesting that a partial hemichrome state in tetrameric Hbs, unlike in monomeric Hbs, does not remove the need for protection from peroxide attack, in contrast to previous results from monomeric Hbs.

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Year:  2009        PMID: 19651045      PMCID: PMC2718161          DOI: 10.1016/j.bpj.2009.04.056

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  41 in total

1.  Novel mechanisms of pH sensitivity in tuna hemoglobin: a structural explanation of the root effect.

Authors:  Takeshi Yokoyama; Khoon Tee Chong; Gentaro Miyazaki; Hideki Morimoto; Daniel T-B Shih; Satoru Unzai; Jeremy R H Tame; Sam-Yong Park
Journal:  J Biol Chem       Date:  2004-04-26       Impact factor: 5.157

2.  The amino acid sequence and oxygen-binding properties of the single hemoglobin of the cold-adapted Antarctic teleost Gymnodraco acuticeps.

Authors:  M Tamburrini; A Brancaccio; R Ippoliti; G di Prisco
Journal:  Arch Biochem Biophys       Date:  1992-01       Impact factor: 4.013

Review 3.  Detection, formation, and relevance of hemichromes and hemochromes.

Authors:  J M Rifkind; O Abugo; A Levy; J Heim
Journal:  Methods Enzymol       Date:  1994       Impact factor: 1.600

Review 4.  Structure-function relationships in the growing hexa-coordinate hemoglobin sub-family.

Authors:  Daniele de Sanctis; Alessandra Pesce; Marco Nardini; Martino Bolognesi; Alessio Bocedi; Paolo Ascenzi
Journal:  IUBMB Life       Date:  2004 Nov-Dec       Impact factor: 3.885

5.  Peroxidation of linoleate at physiological pH: hemichrome formation by substrate binding protects against metmyoglobin activation by hydrogen peroxide.

Authors:  C P Baron; L H Skibsted; H J Andersen
Journal:  Free Radic Biol Med       Date:  2000-02-15       Impact factor: 7.376

6.  High resolution crystal structure of deoxy hemoglobin from Trematomus bernacchii at different pH values: the role of histidine residues in modulating the strength of the root effect.

Authors:  Lelio Mazzarella; Alessandro Vergara; Luigi Vitagliano; Antonello Merlino; Giovanna Bonomi; Sonia Scala; Cinzia Verde; Guido di Prisco
Journal:  Proteins       Date:  2006-11-01

7.  Trehalose glass-facilitated thermal reduction of metmyoglobin and methemoglobin.

Authors:  Anandhi Ray; Benjamin A Friedman; Joel M Friedman
Journal:  J Am Chem Soc       Date:  2002-06-26       Impact factor: 15.419

8.  The oxidation process of Antarctic fish hemoglobins.

Authors:  Luigi Vitagliano; Giovanna Bonomi; Antonio Riccio; Guido di Prisco; Giulietta Smulevich; Lelio Mazzarella
Journal:  Eur J Biochem       Date:  2004-05

9.  Correlation between functional and structural changes of reduced and oxidized trout hemoglobins I and IV at different pHs. A circular dichroism study.

Authors:  Rosita Gabbianelli; Giovanna Zolese; Enrico Bertoli; Giancarlo Falcioni
Journal:  Eur J Biochem       Date:  2004-05

10.  Structure of deoxyhaemoglobin of the antarctic fish Pagothenia bernacchii with an analysis of the structural basis of the root effect by comparison of the liganded and unliganded haemoglobin structures.

Authors:  N Ito; N H Komiyama; G Fermi
Journal:  J Mol Biol       Date:  1995-07-28       Impact factor: 5.469

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  4 in total

1.  Crystallization, preliminary X-ray diffraction studies and Raman microscopy of the major haemoglobin from the sub-Antarctic fish Eleginops maclovinus in the carbomonoxy form.

Authors:  Antonello Merlino; Luigi Vitagliano; Anna Balsamo; Francesco P Nicoletti; Barry D Howes; Daniela Giordano; Daniela Coppola; Guido di Prisco; Cinzia Verde; Giulietta Smulevich; Lelio Mazzarella; Alessandro Vergara
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-10-29

2.  An order-disorder transition plays a role in switching off the root effect in fish hemoglobins.

Authors:  Alessandro Vergara; Luigi Vitagliano; Antonello Merlino; Filomena Sica; Katia Marino; Cinzia Verde; Guido di Prisco; Lelio Mazzarella
Journal:  J Biol Chem       Date:  2010-07-07       Impact factor: 5.157

3.  Ligand accessibility to heme cytochrome b5 coordinating sphere and enzymatic activity enhancement upon tyrosine ionization.

Authors:  Alejandro K Samhan-Arias; Cristina M Cordas; Marta S Carepo; Luisa B Maia; Carlos Gutierrez-Merino; Isabel Moura; José J G Moura
Journal:  J Biol Inorg Chem       Date:  2019-03-05       Impact factor: 3.358

4.  The unique structural features of carbonmonoxy hemoglobin from the sub-Antarctic fish Eleginops maclovinus.

Authors:  Nicole Balasco; Luigi Vitagliano; Antonello Merlino; Cinzia Verde; Lelio Mazzarella; Alessandro Vergara
Journal:  Sci Rep       Date:  2019-12-12       Impact factor: 4.379

  4 in total

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