Literature DB >> 1859869

Expression of nuclear tRNA(Tyr) genes from Arabidopsis thaliana in HeLa cell and wheat germ extracts.

N Stange1, D Beier, H Beier.   

Abstract

The transcription of thirteen Arabidopsis tRNA(Tyr) genes in a tRNA gene cluster was studied in HeLa cell nuclear extracts. All tRNA(Tyr) genes are efficiently transcribed. Initiation of transcription starts at adenosine residues at positions -5 or -6, and termination occurs at an oligo(T) stretch located 17 to 21 bp downstream of the 3' end of the structural genes depending on the gene studied. Maturation of intron-containing pre-tRNAs was compared in HeLa cell and wheat germ extracts and revealed that 5' and 3' end processing precedes splicing in both systems. Two pre-tRNAs which carry mutations in the mature domain are not processed at all in the HeLa extract, whereas one of them matures with low efficiency in the wheat germ extract. The thirteen pre-tRNAs(Tyr) possess highly conserved intron sequences of 12 nucleotides. Twelve of these introns are efficiently excised, whereas one is removed at a reduced rate, possibly due to a slightly destabilized extended anticodon stem.

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Year:  1991        PMID: 1859869     DOI: 10.1007/bf00015078

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  26 in total

1.  Use of in vitro 32P labeling in the sequence analysis of nonradioactive tRNAs.

Authors:  M Silberklang; A M Gillum; U L RajBhandary
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

2.  APhaseolus vulgaris mitochondrial tRNA(Leu) is identical to its cytoplasmic counterpart: sequencing andin vivo transcription of the gene corresponding to the cytoplasmic tRNA(Leu.).

Authors:  G A Green; L Marechal; J H Weil; P Guillemaut
Journal:  Plant Mol Biol       Date:  1987-01       Impact factor: 4.076

3.  Genes, variant genes, and pseudogenes of the human tRNA(Val) gene family are differentially expressed in HeLa cells and in human placenta.

Authors:  C Schmutzler; H J Gross
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

4.  Primer extension analysis of tRNA gene transcripts synthesized in vitro and in vivo.

Authors:  T Dingermann; K Nerke
Journal:  Anal Biochem       Date:  1987-05-01       Impact factor: 3.365

5.  Characterization of tRNA precursor splicing in mammalian extracts.

Authors:  F A Laski; A Z Fire; U L RajBhandary; P A Sharp
Journal:  J Biol Chem       Date:  1983-10-10       Impact factor: 5.157

6.  Transfer RNA splicing in Saccharomyces cerevisiae: defining the substrates.

Authors:  R C Ogden; M C Lee; G Knapp
Journal:  Nucleic Acids Res       Date:  1984-12-21       Impact factor: 16.971

7.  UAG readthrough during TMV RNA translation: isolation and sequence of two tRNAs with suppressor activity from tobacco plants.

Authors:  H Beier; M Barciszewska; G Krupp; R Mitnacht; H J Gross
Journal:  EMBO J       Date:  1984-02       Impact factor: 11.598

8.  Genetic analysis of the processing of a spliced tRNA.

Authors:  K Nishikura; J Kurjan; B D Hall; E M De Robertis
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

9.  A cell-free plant extract for accurate pre-tRNA processing, splicing and modification.

Authors:  N Stange; H Beier
Journal:  EMBO J       Date:  1987-09       Impact factor: 11.598

10.  A human and a plant intron-containing tRNATyr gene are both transcribed in a HeLa cell extract but spliced along different pathways.

Authors:  H van Tol; N Stange; H J Gross; H Beier
Journal:  EMBO J       Date:  1987-01       Impact factor: 11.598

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  14 in total

1.  Translational nonsense codon suppression as indicator for functional pre-tRNA splicing in transformed Arabidopsis hypocotyl-derived calli.

Authors:  Kazuhito Akama; Hildburg Beier
Journal:  Nucleic Acids Res       Date:  2003-02-15       Impact factor: 16.971

2.  Expression of variant nuclear Arabidopsis tRNA(Ser) genes and pre-tRNA maturation differ in HeLa, yeast and wheat germ extracts.

Authors:  D Beier; H Beier
Journal:  Mol Gen Genet       Date:  1992-05

3.  Nucleotide sequences and functional characterization of two tobacco UAG suppressor tRNA(Gln) isoacceptors and their genes.

Authors:  M Grimm; A Nass; C Schüll; H Beier
Journal:  Plant Mol Biol       Date:  1998-11       Impact factor: 4.076

4.  Implication of 5'-flanking sequence elements in expression of a plant tRNA(Leu) gene.

Authors:  N Choisne; V T Carneiro; G Pelletier; I Small
Journal:  Plant Mol Biol       Date:  1998-01       Impact factor: 4.076

5.  Transfer RNA-mediated suppression of stop codons in protoplasts and transgenic plants.

Authors:  V T Carneiro; G Pelletier; I Small
Journal:  Plant Mol Biol       Date:  1993-07       Impact factor: 4.076

6.  Another heritage from the RNA world: self-excision of intron sequence from nuclear pre-tRNAs.

Authors:  U Weber; H Beier; H J Gross
Journal:  Nucleic Acids Res       Date:  1996-06-15       Impact factor: 16.971

7.  Splicing of arabidopsis tRNA(Met) precursors in tobacco cell and wheat germ extracts.

Authors:  K Akama; V Junker; Y Yukawa; M Sugiura; H Beier
Journal:  Plant Mol Biol       Date:  2000-09       Impact factor: 4.076

8.  Nucleotide sequences of nuclear tRNA(Cys) genes from Nicotiana and Arabidopsis and expression in HeLa cell extract.

Authors:  C Urban; K N Smith; H Beier
Journal:  Plant Mol Biol       Date:  1996-11       Impact factor: 4.076

9.  The tRNA(Ser)-isoacceptors and their genes in Nicotiana rustica: genome organization, expression in vitro and sequence analyses.

Authors:  T Teichmann; C Urban; H Beier
Journal:  Plant Mol Biol       Date:  1994-03       Impact factor: 4.076

10.  The tRNA(Tyr) multigene family of Nicotiana rustica: genome organization, sequence analyses and expression in vitro.

Authors:  T Fuchs; D Beier; H Beier
Journal:  Plant Mol Biol       Date:  1992-12       Impact factor: 4.076

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