Literature DB >> 16453503

UAG readthrough during TMV RNA translation: isolation and sequence of two tRNAs with suppressor activity from tobacco plants.

H Beier1, M Barciszewska, G Krupp, R Mitnacht, H J Gross.   

Abstract

The hypothetical replicase or replicase subunit cistron in the 5'-proximal part of tobacco mosaic virus (TMV) RNA yields a major 126-K protein and a minor 183-K ;readthrough' protein in vivo and in vitro. Two natural suppressor tRNAs were purified from uninfected tobacco plants on the basis of their ability to promote readthrough over the corresponding UAG termination codon in vitro. In a reticulocyte lysate the yield of 183-K readthrough protein increases from 10% in the absence of added tobacco plant tRNA up to 35% in the case of pure tRNA added. Their amino acid acceptance and anticodon sequence (GpsiA) identifies the two natural suppressor tRNAs as the two normal major cytoplasmic tyrosine-specific tRNAs. tRNA(1) has an A:U pair at the base of the TpsiC stem and an unmodified G(10), whereas tRNA(2) contains a G:C pair in the corresponding location and mG in position 10. This is the first case that, in a higher eukaryote, the complete structure is known of both the natural suppressor tRNAs and the corresponding viral RNA on which they exert their function. The corresponding codon-anticodon interaction, which is not in accordance with the wobble hypothesis, and the possible biological significance of the readthrough phenomenon is discussed.

Entities:  

Year:  1984        PMID: 16453503      PMCID: PMC557348          DOI: 10.1002/j.1460-2075.1984.tb01810.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  36 in total

1.  Quantitative film detection of 3H and 14C in polyacrylamide gels by fluorography.

Authors:  R A Laskey; A D Mills
Journal:  Eur J Biochem       Date:  1975-08-15

2.  Nucleotide sequence of salmon testes and salmon liver cytoplasmic initiator tRNA.

Authors:  A M Gillum; N Urquhart; M Smith; U L RajBhandary
Journal:  Cell       Date:  1975-11       Impact factor: 41.582

3.  Sequence analysis of 5'[32P] labeled mRNA and tRNA using polyacrylamide gel electrophoresis.

Authors:  R E Lockard; B Alzner-Deweerd; J E Heckman; J MacGee; M W Tabor; U L RajBhandary
Journal:  Nucleic Acids Res       Date:  1978-01       Impact factor: 16.971

4.  Use of specific endonuclease cleavage in RNA sequencing-an enzymic method for distinguishing between cytidine and uridine residues.

Authors:  R C Gupta; K Randerath
Journal:  Nucleic Acids Res       Date:  1977-10       Impact factor: 16.971

5.  Characterization and in vitro translation of the RNAs from less-than-full-length, virus-related, nucleoprotein rods present in tobacco mosaic virus preparations.

Authors:  R N Beachy; M Zaitlin
Journal:  Virology       Date:  1977-08       Impact factor: 3.616

6.  Replication of tobacco mosaic virus. V. Properties of the bound and solubilized replicase.

Authors:  M Zaitlin; C T Duda; M A Petti
Journal:  Virology       Date:  1973-06       Impact factor: 3.616

7.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

8.  The effect of tobacco mosaic virus infection on host and virus-specific protein synthesis in protoplasts.

Authors:  A Siegel; V Hari; K Kolacz
Journal:  Virology       Date:  1978-04       Impact factor: 3.616

9.  The nucleotide sequence of formylmethionine tRNA from Mycoplasma mycoides sp. capri.

Authors:  R T Walker; U L RajBhandary
Journal:  Nucleic Acids Res       Date:  1978-01       Impact factor: 16.971

10.  Mapping adenines, guanines, and pyrimidines in RNA.

Authors:  H Donis-Keller; A M Maxam; W Gilbert
Journal:  Nucleic Acids Res       Date:  1977-08       Impact factor: 16.971

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  86 in total

Review 1.  Misreading of termination codons in eukaryotes by natural nonsense suppressor tRNAs.

Authors:  H Beier; M Grimm
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

2.  Replication of plant RNA virus genomes in a cell-free extract of evacuolated plant protoplasts.

Authors:  Keisuke Komoda; Satoshi Naito; Masayuki Ishikawa
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-09       Impact factor: 11.205

3.  Chloroplast tRNA(Asp): nucleotide sequence and variation of in vivo levels during plastid maturation.

Authors:  A Schön; S Gough; D Söll
Journal:  Plant Mol Biol       Date:  1992-11       Impact factor: 4.076

4.  Molecular characterization of two types of 22 kilodalton alpha-zein genes in a gene cluster in maize.

Authors:  C N Liu; I Rubenstein
Journal:  Mol Gen Genet       Date:  1992-08

5.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  M Sprinzl; N Dank; S Nock; A Schön
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

Review 6.  Eucaryotic codes.

Authors:  F Caron
Journal:  Experientia       Date:  1990-12-01

7.  Bipartite signal for read-through suppression in murine leukemia virus mRNA: an eight-nucleotide purine-rich sequence immediately downstream of the gag termination codon followed by an RNA pseudoknot.

Authors:  Y X Feng; H Yuan; A Rein; J G Levin
Journal:  J Virol       Date:  1992-08       Impact factor: 5.103

8.  In vitro mutagenesis of biologically active transcripts of beet necrotic yellow vein virus RNA 2: evidence that a domain of the 75-kDa readthrough protein is important for efficient virus assembly.

Authors:  C Schmitt; E Balmori; G Jonard; K E Richards; H Guilley
Journal:  Proc Natl Acad Sci U S A       Date:  1992-07-01       Impact factor: 11.205

9.  Nucleotide sequence and functional characterization of a mitochondrial tRNA(Trp) from Tetrahymena thermophila.

Authors:  A Hekele; H Beier
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

Review 10.  Distinct genetic code expansion strategies for selenocysteine and pyrrolysine are reflected in different aminoacyl-tRNA formation systems.

Authors:  Jing Yuan; Patrick O'Donoghue; Alex Ambrogelly; Sarath Gundllapalli; R Lynn Sherrer; Sotiria Palioura; Miljan Simonović; Dieter Söll
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

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