Literature DB >> 18596227

A molecular signaling model of platelet phosphoinositide and calcium regulation during homeostasis and P2Y1 activation.

Jeremy E Purvis1, Manash S Chatterjee, Lawrence F Brass, Scott L Diamond.   

Abstract

To quantify how various molecular mechanisms are integrated to maintain platelet homeostasis and allow responsiveness to adenosine diphosphate (ADP), we developed a computational model of the human platelet. Existing kinetic information for 77 reactions, 132 fixed kinetic rate constants, and 70 species was combined with electrochemical calculations, measurements of platelet ultrastructure, novel experimental results, and published single-cell data. The model accurately predicted: (1) steady-state resting concentrations for intracellular calcium, inositol 1,4,5-trisphosphate, diacylglycerol, phosphatidic acid, phosphatidylinositol, phosphatidylinositol phosphate, and phosphatidylinositol 4,5-bisphosphate; (2) transient increases in intracellular calcium, inositol 1,4,5-trisphosphate, and G(q)-GTP in response to ADP; and (3) the volume of the platelet dense tubular system. A more stringent test of the model involved stochastic simulation of individual platelets, which display an asynchronous calcium spiking behavior in response to ADP. Simulations accurately reproduced the broad frequency distribution of measured spiking events and demonstrated that asynchronous spiking was a consequence of stochastic fluctuations resulting from the small volume of the platelet. The model also provided insights into possible mechanisms of negative-feedback signaling, the relative potency of platelet agonists, and cell-to-cell variation across platelet populations. This integrative approach to platelet biology offers a novel and complementary strategy to traditional reductionist methods.

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Year:  2008        PMID: 18596227      PMCID: PMC2581995          DOI: 10.1182/blood-2008-05-157883

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  44 in total

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  29 in total

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2.  LipidFinder: A computational workflow for discovery of lipids identifies eicosanoid-phosphoinositides in platelets.

Authors:  Anne O'Connor; Christopher J Brasher; David A Slatter; Sven W Meckelmann; Jade I Hawksworth; Stuart M Allen; Valerie B O'Donnell
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Review 3.  Systems biology of coagulation.

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Journal:  J Thromb Haemost       Date:  2013-06       Impact factor: 5.824

4.  Systems modeling of Ca(2+) homeostasis and mobilization in platelets mediated by IP3 and store-operated Ca(2+) entry.

Authors:  Andrew T Dolan; Scott L Diamond
Journal:  Biophys J       Date:  2014-05-06       Impact factor: 4.033

5.  Potassium 2-(1-hydroxypentyl)-benzoate inhibits ADP-induced rat platelet aggregation through P2Y1-PLC signaling pathways.

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7.  Systems biology of coagulation initiation: kinetics of thrombin generation in resting and activated human blood.

Authors:  Manash S Chatterjee; William S Denney; Huiyan Jing; Scott L Diamond
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Review 8.  Harnessing the platelet signaling network to produce an optimal hemostatic response.

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Review 9.  Systems Analysis of Thrombus Formation.

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10.  Steady-state kinetic modeling constrains cellular resting states and dynamic behavior.

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Journal:  PLoS Comput Biol       Date:  2009-03-06       Impact factor: 4.475

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