Literature DB >> 16860723

Simulating cell biology.

Steven S Andrews1, Adam P Arkin.   

Abstract

Mesh:

Year:  2006        PMID: 16860723     DOI: 10.1016/j.cub.2006.06.048

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


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  9 in total

1.  Network inference, analysis, and modeling in systems biology.

Authors:  Réka Albert
Journal:  Plant Cell       Date:  2007-11-30       Impact factor: 11.277

2.  Coarse-grained molecular simulation of diffusion and reaction kinetics in a crowded virtual cytoplasm.

Authors:  Douglas Ridgway; Gordon Broderick; Ana Lopez-Campistrous; Melania Ru'aini; Philip Winter; Matthew Hamilton; Pierre Boulanger; Andriy Kovalenko; Michael J Ellison
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

3.  Simplification of stochastic chemical reaction models with fast and slow dynamics.

Authors:  Guang Qiang Dong; Luke Jakobowski; Marco A J Iafolla; David R McMillen
Journal:  J Biol Phys       Date:  2007-09-05       Impact factor: 1.365

4.  Detailed simulations of cell biology with Smoldyn 2.1.

Authors:  Steven S Andrews; Nathan J Addy; Roger Brent; Adam P Arkin
Journal:  PLoS Comput Biol       Date:  2010-03-12       Impact factor: 4.475

Review 5.  Decoding the quantitative nature of TGF-beta/Smad signaling.

Authors:  David C Clarke; Xuedong Liu
Journal:  Trends Cell Biol       Date:  2008-08-15       Impact factor: 20.808

6.  A molecular signaling model of platelet phosphoinositide and calcium regulation during homeostasis and P2Y1 activation.

Authors:  Jeremy E Purvis; Manash S Chatterjee; Lawrence F Brass; Scott L Diamond
Journal:  Blood       Date:  2008-07-02       Impact factor: 22.113

7.  The Spatial Chemical Langevin Equation and Reaction Diffusion Master Equations: moments and qualitative solutions.

Authors:  Atiyo Ghosh; Andre Leier; Tatiana T Marquez-Lago
Journal:  Theor Biol Med Model       Date:  2015-02-27       Impact factor: 2.432

8.  Dimensionality of Motion and Binding Valency Govern Receptor-Ligand Kinetics As Revealed by Agent-Based Modeling.

Authors:  Teresa Lehnert; Marc Thilo Figge
Journal:  Front Immunol       Date:  2017-11-30       Impact factor: 7.561

9.  Steady-state kinetic modeling constrains cellular resting states and dynamic behavior.

Authors:  Jeremy E Purvis; Ravi Radhakrishnan; Scott L Diamond
Journal:  PLoS Comput Biol       Date:  2009-03-06       Impact factor: 4.475

  9 in total

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