Literature DB >> 18583344

Effect of the C-terminal truncation on the functional cycle of chaperonin GroEL: implication that the C-terminal region facilitates the transition from the folding-arrested to the folding-competent state.

Mihoko Suzuki1, Taro Ueno, Ryo Iizuka, Takahiro Miura, Tamotsu Zako, Rena Akahori, Takeo Miyake, Naonobu Shimamoto, Mutsuko Aoki, Takashi Tanii, Iwao Ohdomari, Takashi Funatsu.   

Abstract

To elucidate the exact role of the C-terminal region of GroEL in its functional cycle, the C-terminal 20-amino acid truncated mutant of GroEL was constructed. The steady-state ATPase rate and duration of GroES binding showed that the functional cycle of the truncated GroEL is extended by approximately 2 s in comparison with that of the wild type, without interfering with the basic functions of GroEL. We have proposed a model for the functional cycle of GroEL, which consists of two rate-limiting steps of approximately 3- and approximately 5-s duration (Ueno, T., Taguchi, H., Tadakuma, H., Yoshida, M., and Funatsu, T. (2004) Mol. Cell 14, 423-434 g). According to the model, detailed kinetic studies were performed. We found that a 20-residue truncation of the C terminus extends the time until inorganic phosphate is generated and the time for arresting protein folding in the central cavity, i.e. the lifetime of the first rate-limiting step in the functional cycle, to an approximately 5-s duration. These results suggest that the integrity of the C-terminal region facilitates the transition from the first to the second rate-limiting state.

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Year:  2008        PMID: 18583344      PMCID: PMC3259756          DOI: 10.1074/jbc.M804090200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  34 in total

1.  GroEL binds artificial proteins with random sequences.

Authors:  K Aoki; F Motojima; H Taguchi; T Yomo; M Yoshida
Journal:  J Biol Chem       Date:  2000-05-05       Impact factor: 5.157

2.  Probing protein-protein interactions in real time.

Authors:  M B Viani; L I Pietrasanta; J B Thompson; A Chand; I C Gebeshuber; J H Kindt; M Richter; H G Hansma; P K Hansma
Journal:  Nat Struct Biol       Date:  2000-08

3.  Single-molecule observation of protein-protein interactions in the chaperonin system.

Authors:  H Taguchi; T Ueno; H Tadakuma; M Yoshida; T Funatsu
Journal:  Nat Biotechnol       Date:  2001-09       Impact factor: 54.908

Review 4.  Molecular chaperones in the cytosol: from nascent chain to folded protein.

Authors:  F Ulrich Hartl; Manajit Hayer-Hartl
Journal:  Science       Date:  2002-03-08       Impact factor: 47.728

5.  Discrimination of ATP, ADP, and AMPPNP by chaperonin GroEL: hexokinase treatment revealed the exclusive role of ATP.

Authors:  Fumihiro Motojima; Masasuke Yoshida
Journal:  J Biol Chem       Date:  2003-05-07       Impact factor: 5.157

6.  Zero-mode waveguides for single-molecule analysis at high concentrations.

Authors:  M J Levene; J Korlach; S W Turner; M Foquet; H G Craighead; W W Webb
Journal:  Science       Date:  2003-01-31       Impact factor: 47.728

7.  GroEL mediates protein folding with a two successive timer mechanism.

Authors:  Taro Ueno; Hideki Taguchi; Hisashi Tadakuma; Masasuke Yoshida; Takashi Funatsu
Journal:  Mol Cell       Date:  2004-05-21       Impact factor: 17.970

8.  Essential role of the chaperonin folding compartment in vivo.

Authors:  Yun-Chi Tang; Hung-Chun Chang; Kausik Chakraborty; F Ulrich Hartl; Manajit Hayer-Hartl
Journal:  EMBO J       Date:  2008-04-17       Impact factor: 11.598

9.  A reversible unfolding reaction of swine pepsin; implications for pepsinogen's folding mechanism.

Authors:  P McPhie
Journal:  Biochem Biophys Res Commun       Date:  1989-01-16       Impact factor: 3.575

10.  Hydrophilic residues at the apical domain of GroEL contribute to GroES binding but attenuate polypeptide binding.

Authors:  F Motojima; T Makio; K Aoki; Y Makino; K Kuwajima; M Yoshida
Journal:  Biochem Biophys Res Commun       Date:  2000-01-27       Impact factor: 3.575

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  16 in total

1.  Indole-3-glycerol-phosphate synthase is recognized by a cold-inducible group II chaperonin in Thermococcus kodakarensis.

Authors:  Le Gao; Atsushi Danno; Sayaka Fujii; Wakao Fukuda; Tadayuki Imanaka; Shinsuke Fujiwara
Journal:  Appl Environ Microbiol       Date:  2012-03-23       Impact factor: 4.792

2.  Single-molecule study on the decay process of the football-shaped GroEL-GroES complex using zero-mode waveguides.

Authors:  Tomoya Sameshima; Ryo Iizuka; Taro Ueno; Junichi Wada; Mutsuko Aoki; Naonobu Shimamoto; Iwao Ohdomari; Takashi Tanii; Takashi Funatsu
Journal:  J Biol Chem       Date:  2010-05-28       Impact factor: 5.157

3.  Stimulating the substrate folding activity of a single ring GroEL variant by modulating the cochaperonin GroES.

Authors:  Melissa Illingworth; Andrew Ramsey; Zhida Zheng; Lingling Chen
Journal:  J Biol Chem       Date:  2011-07-10       Impact factor: 5.157

4.  Effects of C-terminal Truncation of Chaperonin GroEL on the Yield of In-cage Folding of the Green Fluorescent Protein.

Authors:  So Ishino; Yasushi Kawata; Hideki Taguchi; Naoko Kajimura; Katsumi Matsuzaki; Masaru Hoshino
Journal:  J Biol Chem       Date:  2015-04-17       Impact factor: 5.157

5.  Single-molecule observation of protein folding in symmetric GroEL-(GroES)2 complexes.

Authors:  Yodai Takei; Ryo Iizuka; Taro Ueno; Takashi Funatsu
Journal:  J Biol Chem       Date:  2012-10-09       Impact factor: 5.157

6.  The C-terminal tails of the bacterial chaperonin GroEL stimulate protein folding by directly altering the conformation of a substrate protein.

Authors:  Jeremy Weaver; Hays S Rye
Journal:  J Biol Chem       Date:  2014-06-25       Impact factor: 5.157

7.  Substrate protein dependence of GroEL-GroES interaction cycle revealed by high-speed atomic force microscopy imaging.

Authors:  Daisuke Noshiro; Toshio Ando
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-06-19       Impact factor: 6.237

8.  Analysis of peptides and proteins in their binding to GroEL.

Authors:  Yali Li; Zhida Zheng; Andrew Ramsey; Lingling Chen
Journal:  J Pept Sci       Date:  2010-12       Impact factor: 1.905

9.  A Mutant Chaperonin That Is Functional at Lower Temperatures Enables Hyperthermophilic Archaea To Grow under Cold-Stress Conditions.

Authors:  Le Gao; Tadayuki Imanaka; Shinsuke Fujiwara
Journal:  J Bacteriol       Date:  2015-05-26       Impact factor: 3.490

10.  Mechanism of folding chamber closure in a group II chaperonin.

Authors:  Junjie Zhang; Matthew L Baker; Gunnar F Schröder; Nicholai R Douglas; Stefanie Reissmann; Joanita Jakana; Matthew Dougherty; Caroline J Fu; Michael Levitt; Steven J Ludtke; Judith Frydman; Wah Chiu
Journal:  Nature       Date:  2010-01-21       Impact factor: 49.962

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