Literature DB >> 1854726

Contributions of engineered surface salt bridges to the stability of T4 lysozyme determined by directed mutagenesis.

D P Sun1, U Sauer, H Nicholson, B W Matthews.   

Abstract

Six designed mutants of T4 lysozyme were created in an attempt to create putative salt bridges on the surface of the protein. The first three of the mutants, T115E (Thr 115 to Glu), Q123E, and N144E, were designed to introduce a new charged side chain close to one or more existing charged groups of the opposite sign on the surface of the protein. In each of these cases the putative electrostatic interactions introduced by the mutation include possible salt bridges between residues within consecutive turns of an alpha-helix. Effects of the mutations ranged from no change in stability to a 1.5 degrees C (0.5 kcal/mol) increase in melting temperature. In two cases, secondary (double) mutants were constructed as controls in which the charge partner was removed from the primary mutant structure. These controls proteins indicate that the contributions to stability from each of the engineered salt bridges is very small (about 0.1-0.25 kcal/mol in 0.15 M KCl). The structures of the three primary mutants were determined by X-ray crystallography and shown to be essentially the same as the wild-type structure except at the site of the mutation. Although the introduced charges in the T115E and Q123E structures are within 3-5 A of their intended partner, the introduced side chains and their intended partners were observed to be quite mobile. It has been shown that the salt bridge between His 31 and Asp 70 in T4 lysozyme stabilizes the protein by 3-5 kcal/mol [Anderson, D. E., Becktel, W. J., & Dahlquist, F. W. (1990) Biochemistry 29, 2403-2408]. To test the effectiveness of His...Asp interactions in general, three additional double mutants, K60H/L13D, K83H/A112D, and S90H/Q122D, were created in order to introduce histidine-aspartate charge pairs on the surface of the protein. Each of these mutants destabilizes the protein by 1-3 kcal/mol in 0.15 M KCl at pH values from 2 to 6.5. The X-ray crystallographic structure of the mutant K83H/A112D has been determined and shows that there are backbone conformational changes of 0.3-0.6 A extending over several residues. The introduction of the histidine and aspartate presumably introduces strain into the folded protein that destabilizes this variant. It is concluded that pairs of oppositely charged residues that are on the surface of a protein and have freedom to adopt different conformations do not tend to come together to form structurally localized salt bridges. Rather, such residues tend to remain mobile, interact weakly if at all, and do not contribute significantly to protein stability. It is argued that the entropic cost of localizing a pair of solvent-exposed charged groups on the surface of a protein largely offsets the interaction energy expected from the formation of a defined salt bridge. There are examples of strong salt bridges in proteins, but such interactions require that the folding of the protein provides the requisite driving energy to hold the interacting partners in the correct rigid alignment.

Entities:  

Mesh:

Substances:

Year:  1991        PMID: 1854726     DOI: 10.1021/bi00243a015

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  51 in total

1.  Increasing protein stability by altering long-range coulombic interactions.

Authors:  G R Grimsley; K L Shaw; L R Fee; R W Alston; B M Huyghues-Despointes; R L Thurlkill; J M Scholtz; C N Pace
Journal:  Protein Sci       Date:  1999-09       Impact factor: 6.725

2.  Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species.

Authors:  P J Haney; J H Badger; G L Buldak; C I Reich; C R Woese; G J Olsen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-30       Impact factor: 11.205

3.  Molecular dynamics simulations of wild-type and mutant forms of the Mycobacterium tuberculosis MscL channel.

Authors:  D E Elmore; D A Dougherty
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

4.  Removal of surface charge-charge interactions from ubiquitin leaves the protein folded and very stable.

Authors:  Vakhtang V Loladze; George I Makhatadze
Journal:  Protein Sci       Date:  2002-01       Impact factor: 6.725

5.  Evaluation of the energetic contribution of an ionic network to beta-sheet stability.

Authors:  Kirsten S Lassila; Deepshikha Datta; Stephen L Mayo
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

6.  The effect of net charge on the solubility, activity, and stability of ribonuclease Sa.

Authors:  K L Shaw; G R Grimsley; G I Yakovlev; A A Makarov; C N Pace
Journal:  Protein Sci       Date:  2001-06       Impact factor: 6.725

7.  Distance dependence and salt sensitivity of pairwise, coulombic interactions in a protein.

Authors:  Kelly K Lee; Carolyn A Fitch; Bertrand García-Moreno E
Journal:  Protein Sci       Date:  2002-05       Impact factor: 6.725

8.  Deceleration of the E1P-E2P transition and ion transport by mutation of potentially salt bridge-forming residues Lys-791 and Glu-820 in gastric H+/K+-ATPase.

Authors:  Katharina L Dürr; Ina Seuffert; Thomas Friedrich
Journal:  J Biol Chem       Date:  2010-10-04       Impact factor: 5.157

9.  Raman study of the thermal behaviour and conformational stability of basic pancreatic trypsin inhibitor.

Authors:  Pedro Carmona; Marina Molina; Arantxa Rodríguez-Casado
Journal:  Eur Biophys J       Date:  2003-01-30       Impact factor: 1.733

10.  Functional surfaces of the human immunodeficiency virus type 1 capsid protein.

Authors:  Uta K von Schwedler; Kirsten M Stray; Jennifer E Garrus; Wesley I Sundquist
Journal:  J Virol       Date:  2003-05       Impact factor: 5.103

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.