Literature DB >> 10493585

Increasing protein stability by altering long-range coulombic interactions.

G R Grimsley1, K L Shaw, L R Fee, R W Alston, B M Huyghues-Despointes, R L Thurlkill, J M Scholtz, C N Pace.   

Abstract

It is difficult to increase protein stability by adding hydrogen bonds or burying nonpolar surface. The results described here show that reversing the charge on a side chain on the surface of a protein is a useful way of increasing stability. Ribonuclease T1 is an acidic protein with a pI approximately 3.5 and a net charge of approximately -6 at pH 7. The side chain of Asp49 is hyperexposed, not hydrogen bonded, and 8 A from the nearest charged group. The stability of Asp49Ala is 0.5 kcal/mol greater than wild-type at pH 7 and 0.4 kcal/mol less at pH 2.5. The stability of Asp49His is 1.1 kcal/mol greater than wild-type at pH 6, where the histidine 49 side chain (pKa = 7.2) is positively charged. Similar results were obtained with ribonuclease Sa where Asp25Lys is 0.9 kcal/mol and Glu74Lys is 1.1 kcal/mol more stable than the wild-type enzyme. These results suggest that protein stability can be increased by improving the coulombic interactions among charged groups on the protein surface. In addition, the stability of RNase T1 decreases as more hydrophobic aromatic residues are substituted for Ala49, indicating a reverse hydrophobic effect.

Entities:  

Mesh:

Substances:

Year:  1999        PMID: 10493585      PMCID: PMC2144408          DOI: 10.1110/ps.8.9.1843

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  58 in total

1.  Determination and analysis of urea and guanidine hydrochloride denaturation curves.

Authors:  C N Pace
Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

2.  Protein stability curves.

Authors:  W J Becktel; J A Schellman
Journal:  Biopolymers       Date:  1987-11       Impact factor: 2.505

3.  The interpretation of protein structures: estimation of static accessibility.

Authors:  B Lee; F M Richards
Journal:  J Mol Biol       Date:  1971-02-14       Impact factor: 5.469

4.  Energetics of charge-charge interactions in proteins.

Authors:  M K Gilson; B H Honig
Journal:  Proteins       Date:  1988

5.  Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding.

Authors:  J K Myers; C N Pace; J M Scholtz
Journal:  Protein Sci       Date:  1995-10       Impact factor: 6.725

6.  Effect on protein stability of reversing the charge on amino groups.

Authors:  M Hollecker; T E Creighton
Journal:  Biochim Biophys Acta       Date:  1982-03-04

7.  Ion-pairs in proteins.

Authors:  D J Barlow; J M Thornton
Journal:  J Mol Biol       Date:  1983-08-25       Impact factor: 5.469

8.  Nature of the charge distribution in proteins.

Authors:  A Wada; H Nakamura
Journal:  Nature       Date:  1981-10-29       Impact factor: 49.962

9.  Nuclear magnetic resonance study on the microenvironments of histidine residues of ribonuclease T1 and carboxymethylated ribonuclease T1.

Authors:  F Inagaki; Y Kawano; I Shimada; K Takahashi; T Miyazawa
Journal:  J Biochem       Date:  1981-04       Impact factor: 3.387

10.  Helix stabilization by Glu-...Lys+ salt bridges in short peptides of de novo design.

Authors:  S Marqusee; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

View more
  58 in total

1.  Free energy determinants of tertiary structure and the evaluation of protein models.

Authors:  D Petrey; B Honig
Journal:  Protein Sci       Date:  2000-11       Impact factor: 6.725

2.  Charge-charge interactions influence the denatured state ensemble and contribute to protein stability.

Authors:  C N Pace; R W Alston; K L Shaw
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

3.  The effect of net charge on the solubility, activity, and stability of ribonuclease Sa.

Authors:  K L Shaw; G R Grimsley; G I Yakovlev; A A Makarov; C N Pace
Journal:  Protein Sci       Date:  2001-06       Impact factor: 6.725

4.  Distance dependence and salt sensitivity of pairwise, coulombic interactions in a protein.

Authors:  Kelly K Lee; Carolyn A Fitch; Bertrand García-Moreno E
Journal:  Protein Sci       Date:  2002-05       Impact factor: 6.725

Review 5.  Physical stability of proteins in aqueous solution: mechanism and driving forces in nonnative protein aggregation.

Authors:  Eva Y Chi; Sampathkumar Krishnan; Theodore W Randolph; John F Carpenter
Journal:  Pharm Res       Date:  2003-09       Impact factor: 4.200

6.  An integrated structural and computational study of the thermostability of two thioredoxin mutants from Alicyclobacillus acidocaldarius.

Authors:  Simonetta Bartolucci; Giuseppina De Simone; Stefania Galdiero; Roberto Improta; Valeria Menchise; Carlo Pedone; Emilia Pedone; Michele Saviano
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

7.  Electrostatic interactions in the reconstitution of an SH2 domain from constituent peptide fragments.

Authors:  Deanna Dahlke Ojennus; Sarah E Lehto; Deborah S Wuttke
Journal:  Protein Sci       Date:  2003-01       Impact factor: 6.725

8.  Electrostatic contributions to T4 lysozyme stability: solvent-exposed charges versus semi-buried salt bridges.

Authors:  Feng Dong; Huan-Xiang Zhou
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

9.  Conferring thermostability to mesophilic proteins through optimized electrostatic surfaces.

Authors:  Michael Torrez; Michael Schultehenrich; Dennis R Livesay
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

10.  Increasing protein conformational stability by optimizing beta-turn sequence.

Authors:  Saul R Trevino; Stephanie Schaefer; J Martin Scholtz; C Nick Pace
Journal:  J Mol Biol       Date:  2007-08-09       Impact factor: 5.469

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.