Literature DB >> 1849406

A comparative study of the kinetics and stereochemistry of the serine hydroxymethyltransferase- and tryptophan synthase-catalysed exchange of the pro-2R and pro-2S protons of glycine.

J P Malthouse1, J J Milne, L S Gariani.   

Abstract

The stereospecificity of the serine hydroxymethyltransferase (EC 2.1.2.1)- and tryptophan synthase (EC 4.2.1.20)- catalysed exchange of the pro-2R and pro-2S alpha-protons of glycine was investigated by using 13C n.m.r. The exchange process is described in terms of a minimal four-step mechanism, and a method for analysing the exchange process by complete progress curves is presented. It is shown that serine hydroxymethyltransferase does not have absolute stereospecificity for the pro-2S-proton of glycine, but it catalyses the exchange of this proton 7400 times faster than the pro-2R proton of glycine. Tryptophan synthase is shown preferentially to catalyse the exchange of the pro-2R proton of glycine at a rate 380 times faster than the pro-2S proton of glycine. The exchange rates for the rapidly exchanged alpha-protons of glycine are similar for both enzymes. However, the exchange rates of the slowly exchanged alpha-protons differ by an order of magnitude. The structural features that may be responsible for the differences in the stereospecificity of the two enzymes are discussed.

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Year:  1991        PMID: 1849406      PMCID: PMC1149982          DOI: 10.1042/bj2740807

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  29 in total

1.  Serine transhydroxymethylase: mechanism of aldolase activation by folate.

Authors:  C W Jones; D G Priest
Journal:  Arch Biochem Biophys       Date:  1976-05       Impact factor: 4.013

2.  Stereochemistry and mechanism of reactions catalyzed by tryptophan synthetase and its beta2 subunit.

Authors:  M D Tsai; E Schleicher; R Potts; G E Skye; H G Floss
Journal:  J Biol Chem       Date:  1978-08-10       Impact factor: 5.157

3.  Studies of the reactions of lamb liver serine hydroxymethylase with L-phenylalanine: kinetic isotope effects upon quinonoid intermediate formation.

Authors:  R J Ulevitch; R G Kallen
Journal:  Biochemistry       Date:  1977-11-29       Impact factor: 3.162

4.  Stereochemical evidence for the evolution of pyridoxal-phosphate enzymes of various function from a common ancestor.

Authors:  H C Dunathan; J G Voet
Journal:  Proc Natl Acad Sci U S A       Date:  1974-10       Impact factor: 11.205

5.  The stereochemistry of pyridoxal phosphate enzymes. The absolute stereochemistry of cofactor C' 4 protonation in the transamination of holoserine hydroxymethylase by D-alanine.

Authors:  J G Voet; D M Hindenlang; T J Blanck; R J Ulevitch; R G Kallen; H C Dunathan
Journal:  J Biol Chem       Date:  1973-02-10       Impact factor: 5.157

Review 6.  Stereochemical aspects of pyridoxal phosphate catalysis.

Authors:  H C Dunathan
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1971

Review 7.  Tryptophan synthase: structure, function, and subunit interaction.

Authors:  E W Miles
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1979

Review 8.  Serine hydroxymethyltransferase.

Authors:  L Schirch
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1982

9.  Statistical analysis of enzyme kinetic data.

Authors:  W W Cleland
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

10.  Serine hydroxymethylase. Specificity of bond cleaveage to form quinonoid intermediates and rate of holoenzyme formation.

Authors:  J Hansen; L Davis
Journal:  Biochim Biophys Acta       Date:  1979-06-06
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  5 in total

1.  The structure of serine hydroxymethyltransferase as modeled by homology and validated by site-directed mutagenesis.

Authors:  S Pascarella; S Angelaccio; R Contestabile; S Delle Fratte; M Di Salvo; F Bossa
Journal:  Protein Sci       Date:  1998-09       Impact factor: 6.725

2.  The stereospecificity and catalytic efficiency of the tryptophan synthase-catalysed exchange of the alpha-protons of amino acids.

Authors:  Máire E Níbeilliú; J Paul G Malthouse
Journal:  Biochem J       Date:  2004-08-01       Impact factor: 3.857

3.  The effect of different amino acid side chains on the stereospecificity and catalytic efficiency of the tryptophan synthase-catalysed exchange of the alpha-protons of amino acids.

Authors:  J J Milne; J P Malthouse
Journal:  Biochem J       Date:  1996-03-15       Impact factor: 3.857

4.  Biosynthetically directed ²H labelling for stereospecific resonance assignments of glycine methylene groups.

Authors:  Karin V Loscha; Gottfried Otting
Journal:  J Biomol NMR       Date:  2012-11-29       Impact factor: 2.835

5.  Factors affecting the stereospecificity and catalytic efficiency of the tryptophan synthase-catalysed exchange of the pro-2R and pro-2S protons of glycine.

Authors:  J J Milne; J P Malthouse
Journal:  Biochem J       Date:  1995-11-01       Impact factor: 3.857

  5 in total

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