Literature DB >> 15107013

The stereospecificity and catalytic efficiency of the tryptophan synthase-catalysed exchange of the alpha-protons of amino acids.

Máire E Níbeilliú1, J Paul G Malthouse.   

Abstract

13C-NMR has been used to follow the tryptophan synthase (EC 4.2.1.20) catalysed hydrogen-deuterium exchange of the pro-2R and pro-2S protons of [2-13C]glycine at pH 7.8. 1H-NMR has also been used to follow the tryptophan-synthase-catalysed hydrogen-deuterium exchange of the alpha-protons of a range of L- and D-amino acids at pH 7.8. The pK(a) values of the alpha-protons of these amino acids have been estimated and we have determined whether or not their exchange rates can be predicted from their pK(a) values. With the exception of tryptophan and norleucine, the stereospecificities of the first-order alpha-proton exchange rates are independent of the size and electronegativity of the amino acid R-group. Similar results are obtained with the second-order alpha-proton exchange rates, except that both L-tryptophan and L-serine have much higher stereospecificities than all the other amino acids studied.

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Year:  2004        PMID: 15107013      PMCID: PMC1133895          DOI: 10.1042/BJ20040388

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  27 in total

Review 1.  Using NMR as a probe of protein structure and function.

Authors:  J P Malthouse
Journal:  Biochem Soc Trans       Date:  1999-08       Impact factor: 5.407

Review 2.  Stereospecificity of alpha-proton exchange reactions catalysed by pyridoxal-5'-phosphate-dependent enzymes.

Authors:  J Paul G Malthouse
Journal:  Biochim Biophys Acta       Date:  2003-04-11

3.  The A protein of the tryptophan synthetase of Escherichia coli. Purification, crystallization, and composition studies.

Authors:  U HENNING; D R HELINSKI; F C CHAO; C YANOFSKY
Journal:  J Biol Chem       Date:  1962-05       Impact factor: 5.157

4.  Isolation and characterization of independently folding regions of the beta chain of Escherichia coli tryptophan synthetase.

Authors:  A Högberg-Raibaud; M E Goldberg
Journal:  Biochemistry       Date:  1977-09-06       Impact factor: 3.162

5.  Conformation and reaction specificity in pyridoxal phosphate enzymes.

Authors:  H C Dunathan
Journal:  Proc Natl Acad Sci U S A       Date:  1966-04       Impact factor: 11.205

Review 6.  Proton transfer at carbon.

Authors:  J P Richard; T L Amyes
Journal:  Curr Opin Chem Biol       Date:  2001-12       Impact factor: 8.822

7.  The aspartate aminotransferase-catalysed exchange of the alpha-protons of aspartate and glutamate: the effects of the R386A and R292V mutations on this exchange reaction.

Authors:  M M Mahon; R Graber; P Christen; J P Malthouse
Journal:  Biochim Biophys Acta       Date:  1999-09-14

8.  Intermediate trapping via a conformational switch in the Na(+)-activated tryptophan synthase bienzyme complex.

Authors:  Rodney M Harris; Michael F Dunn
Journal:  Biochemistry       Date:  2002-08-06       Impact factor: 3.162

9.  The mechanism of tryptophan binding to tryptophan synthase from Escherichia coli.

Authors:  A N Lane; K Kirschner
Journal:  Eur J Biochem       Date:  1981-11

10.  The mechanism of binding of L-serine to tryptophan synthase from Escherichia coli.

Authors:  A N Lane; K Kirschner
Journal:  Eur J Biochem       Date:  1983-01-01
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  1 in total

1.  An efficient protocol for the complete incorporation of methyl-protonated alanine in perdeuterated protein.

Authors:  Isabel Ayala; Remy Sounier; Nathalie Usé; Pierre Gans; Jérôme Boisbouvier
Journal:  J Biomol NMR       Date:  2008-12-30       Impact factor: 2.835

  1 in total

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