Literature DB >> 18468947

Use of DNA adducts to identify human health risk from exposure to hazardous environmental pollutants: the increasing role of mass spectrometry in assessing biologically effective doses of genotoxic carcinogens.

Peter B Farmer1, Rajinder Singh.   

Abstract

The carcinogens to which humans are exposed are normally in the form of complex mixtures, and much effort has gone into determining the nature of the most significant carcinogenic components in these mixtures and their mechanisms of action. Essential to achieving this aim in exposed populations is the use of biomarkers, which can characterize the chemical nature of the carcinogens involved and identify key biological effects that result from the exposure. DNA adducts are particularly appropriate as biomarkers in the case of genotoxic carcinogens as they indicate the biologically effective dose of the genotoxin in the target tissue under study. This review considers in particular the use of mass spectrometry (MS), which is having an increasing role in the determination of DNA adducts. Compared to other existing DNA damage detection methods, such as 32P-postlabeling, HPLC-fluorescence or electrochemical detection, immunoassay-based techniques and modified Comet assays, MS provides improved structural characterization of adducts. Greater selectivity in the analyses is achieved by the use of tandem MS with selected reaction monitoring or constant neutral loss of ions. Use of capillary/nano liquid chromatography and micro/nano electrospray ionization improves the analytical sensitivity and higher throughput may be obtained by the use of online-column switching. The application of microfluidics technology offers exciting new possibilities for interfacing sample preparation to the mass spectrometer. Despite these improvements in the use of MS for adduct detection, the main current requirement is to validate these methods both analytically and in molecular epidemiology studies. More knowledge of the stability of stored samples is required. Development of sensitive mass spectrometric DNA adductomic screening systems, and of long-term biomarkers (e.g., phosphotriester adducts that are not repaired efficiently) seems important areas for the future assessment of the effects of human exposure to environmental genotoxins, together with studies of dose-response relationships at low doses.

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Year:  2008        PMID: 18468947     DOI: 10.1016/j.mrrev.2008.03.006

Source DB:  PubMed          Journal:  Mutat Res        ISSN: 0027-5107            Impact factor:   2.433


  24 in total

1.  Nontargeted nucleotide analysis based on benzoylhistamine labeling-MALDI-TOF/TOF-MS: discovery of putative 6-oxo-thymine in DNA.

Authors:  Poguang Wang; David Fisher; Anjana Rao; Roger W Giese
Journal:  Anal Chem       Date:  2012-04-02       Impact factor: 6.986

2.  High-throughput metabolic toxicity screening using magnetic biocolloid reactors and LC-MS/MS.

Authors:  Linlin Zhao; John B Schenkman; James F Rusling
Journal:  Anal Chem       Date:  2010-11-19       Impact factor: 6.986

3.  Evaluating Metabolite-Related DNA Oxidation and Adduct Damage from Aryl Amines Using a Microfluidic ECL Array.

Authors:  Itti Bist; Snehasis Bhakta; Di Jiang; Tia E Keyes; Aaron Martin; Robert J Forster; James F Rusling
Journal:  Anal Chem       Date:  2017-11-09       Impact factor: 6.986

Review 4.  Recent technical and biological development in the analysis of biomarker N-deoxyguanosine-C8-4-aminobiphenyl.

Authors:  Zhidan Chen; Yuesheng Zhang; Paul Vouros
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2018-04-24       Impact factor: 3.205

Review 5.  Stable-isotope dilution LC–MS for quantitative biomarker analysis.

Authors:  Eugene Ciccimaro; Ian A Blair
Journal:  Bioanalysis       Date:  2010-02       Impact factor: 2.681

6.  Photocrosslinking of human telomeric G-quadruplex loops by anti cyclobutane thymine dimer formation.

Authors:  Dian G T Su; Huafeng Fang; Michael L Gross; John-Stephen A Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-23       Impact factor: 11.205

Review 7.  Mass spectrometry of structurally modified DNA.

Authors:  Natalia Tretyakova; Peter W Villalta; Srikanth Kotapati
Journal:  Chem Rev       Date:  2013-02-26       Impact factor: 60.622

Review 8.  Quantitation of DNA adducts by stable isotope dilution mass spectrometry.

Authors:  Natalia Tretyakova; Melissa Goggin; Dewakar Sangaraju; Gregory Janis
Journal:  Chem Res Toxicol       Date:  2012-08-28       Impact factor: 3.739

9.  An improved liquid chromatography-tandem mass spectrometry method for the quantification of 4-aminobiphenyl DNA adducts in urinary bladder cells and tissues.

Authors:  Kristen L Randall; Dayana Argoti; Joseph D Paonessa; Yi Ding; Zachary Oaks; Yuesheng Zhang; Paul Vouros
Journal:  J Chromatogr A       Date:  2009-11-10       Impact factor: 4.759

Review 10.  The analysis of DNA adducts: the transition from (32)P-postlabeling to mass spectrometry.

Authors:  Joshua J Klaene; Vaneet K Sharma; James Glick; Paul Vouros
Journal:  Cancer Lett       Date:  2012-09-04       Impact factor: 8.679

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