Literature DB >> 23441727

Mass spectrometry of structurally modified DNA.

Natalia Tretyakova1, Peter W Villalta, Srikanth Kotapati.   

Abstract

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Year:  2013        PMID： 23441727      PMCID： PMC3700556          DOI： 10.1021/cr300391r

Source DB:  PubMed          Journal:  Chem Rev        ISSN： 0009-2665            Impact factor:   60.622


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  313 in total

1.  Creation and comparison of MS/MS spectral libraries using quadrupole ion trap and triple-quadrupole mass spectrometers.

Authors:  Jonathan L Josephs; Mark Sanders
Journal:  Rapid Commun Mass Spectrom       Date:  2004       Impact factor: 2.419

2.  Rapid turnover of DNA methylation in human cells.

Authors:  Yoshiaki Yamagata; Pàl Szabó; David Szüts; Caroline Bacquet; Tamàs Arànyi; Andras Páldi
Journal:  Epigenetics       Date:  2012-02       Impact factor: 4.528

3.  LC/MS/MS method for the quantitation of trans-2-hexenal-derived exocyclic 1,N(2)-propanodeoxyguanosine in DNA.

Authors:  Matthew D Stout; Yo-Chan Jeong; Gunnar Boysen; Yutai Li; Ramiah Sangaiah; Louise M Ball; Avram Gold; James A Swenberg
Journal:  Chem Res Toxicol       Date:  2006-04       Impact factor: 3.739

4.  Biomonitoring of aristolactam-DNA adducts in human tissues using ultra-performance liquid chromatography/ion-trap mass spectrometry.

Authors:  Byeong Hwa Yun; Thomas A Rosenquist; Viktoriya Sidorenko; Charles R Iden; Chung-Hsin Chen; Yeong-Shiau Pu; Radha Bonala; Francis Johnson; Kathleen G Dickman; Arthur P Grollman; Robert J Turesky
Journal:  Chem Res Toxicol       Date:  2012-05-04       Impact factor: 3.739

5.  Determination of lucidin-specific DNA adducts by liquid chromatography with tandem mass spectrometry in the livers and kidneys of rats given lucidin-3-O-primeveroside.

Authors:  Yuji Ishii; Kaoru Inoue; Shinji Takasu; Meilan Jin; Kohei Matsushita; Ken Kuroda; Kiyoshi Fukuhara; Akiyoshi Nishikawa; Takashi Umemura
Journal:  Chem Res Toxicol       Date:  2012-04-30       Impact factor: 3.739

6.  Separation and sequencing of isomeric oligonucleotide adducts using monolithic columns by ion-pair reversed-phase nano-HPLC coupled to ion trap mass spectrometry.

Authors:  Wennan Xiong; James Glick; Yiqing Lin; Paul Vouros
Journal:  Anal Chem       Date:  2007-06-19       Impact factor: 6.986

7.  In vitro bypass of the major malondialdehyde- and base propenal-derived DNA adduct by human Y-family DNA polymerases κ, ι, and Rev1.

Authors:  Leena Maddukuri; Robert L Eoff; Jeong-Yun Choi; Carmelo J Rizzo; F Peter Guengerich; Lawrence J Marnett
Journal:  Biochemistry       Date:  2010-09-28       Impact factor: 3.162

8.  Quantification of 1,N6-etheno-2'-deoxyadenosine in human urine by column-switching LC/APCI-MS/MS.

Authors:  Peter R Hillestrøm; Anne-Mette Hoberg; Allan Weimann; Henrik E Poulsen
Journal:  Free Radic Biol Med       Date:  2004-06-01       Impact factor: 7.376

9.  Structure elucidation of DNA interstrand cross-link by a combination of nuclease P1 digestion with mass spectrometry.

Authors:  Yuesong Wang; Yinsheng Wang
Journal:  Anal Chem       Date:  2003-11-15       Impact factor: 6.986

10.  Quantitative analysis of the oxidative DNA lesion, 2,2-diamino-4-(2-deoxy-beta-D-erythro-pentofuranosyl)amino]-5(2H)-oxazolone (oxazolone), in vitro and in vivo by isotope dilution-capillary HPLC-ESI-MS/MS.

Authors:  Brock Matter; Danuta Malejka-Giganti; A Saari Csallany; Natalia Tretyakova
Journal:  Nucleic Acids Res       Date:  2006-10-04       Impact factor: 16.971
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  38 in total

Review 1.  A role for the base excision repair enzyme NEIL3 in replication-dependent repair of interstrand DNA cross-links derived from psoralen and abasic sites.

Authors:  Zhiyu Yang; Maryam Imani Nejad; Jacqueline Gamboa Varela; Nathan E Price; Yinsheng Wang; Kent S Gates
Journal:  DNA Repair (Amst)       Date:  2017-02-20

Review 2.  Chemical Analysis of DNA Damage.

Authors:  Yang Yu; Pengcheng Wang; Yuxiang Cui; Yinsheng Wang
Journal:  Anal Chem       Date:  2017-11-07       Impact factor: 6.986

3.  Mapping three guanine oxidation products along DNA following exposure to three types of reactive oxygen species.

Authors:  Brock Matter; Christopher L Seiler; Kristopher Murphy; Xun Ming; Jianwei Zhao; Bruce Lindgren; Roger Jones; Natalia Tretyakova
Journal:  Free Radic Biol Med       Date:  2018-04-25       Impact factor: 7.376

Review 4.  Recent technical and biological development in the analysis of biomarker N-deoxyguanosine-C8-4-aminobiphenyl.

Authors:  Zhidan Chen; Yuesheng Zhang; Paul Vouros
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2018-04-24       Impact factor: 3.205

Review 5.  DNA adducts: Formation, biological effects, and new biospecimens for mass spectrometric measurements in humans.

Authors:  Byeong Hwa Yun; Jingshu Guo; Medjda Bellamri; Robert J Turesky
Journal:  Mass Spectrom Rev       Date:  2018-06-11       Impact factor: 10.946

Review 6.  Formation and repair of oxidatively generated damage in cellular DNA.

Authors:  Jean Cadet; Kelvin J A Davies; Marisa Hg Medeiros; Paolo Di Mascio; J Richard Wagner
Journal:  Free Radic Biol Med       Date:  2017-01-02       Impact factor: 7.376

7.  Collision-Induced Dissociation Studies of Protonated Ions of Alkylated Thymidine and 2'-Deoxyguanosine.

Authors:  Yuxiang Cui; Jun Yuan; Pengcheng Wang; Jun Wu; Yang Yu; Yinsheng Wang
Journal:  J Am Soc Mass Spectrom       Date:  2020-03-12       Impact factor: 3.109

8.  Methods and Challenges for Computational Data Analysis for DNA Adductomics.

Authors:  Scott J Walmsley; Jingshu Guo; Jinhua Wang; Peter W Villalta; Robert J Turesky
Journal:  Chem Res Toxicol       Date:  2019-11-06       Impact factor: 3.739

9.  Quantification of Azaserine-Induced Carboxymethylated and Methylated DNA Lesions in Cells by Nanoflow Liquid Chromatography-Nanoelectrospray Ionization Tandem Mass Spectrometry Coupled with the Stable Isotope-Dilution Method.

Authors:  Yang Yu; Jianshuang Wang; Pengcheng Wang; Yinsheng Wang
Journal:  Anal Chem       Date:  2016-08-02       Impact factor: 6.986

10.  Direct LC-MS/MS Detection of Guanine Oxidations in Exon 7 of the p53 Tumor Suppressor Gene.

Authors:  Di Jiang; Spundana Malla; You-Jun Fu; Dharamainder Choudhary; James F Rusling
Journal:  Anal Chem       Date:  2017-11-22       Impact factor: 6.986
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