Literature DB >> 21090635

High-throughput metabolic toxicity screening using magnetic biocolloid reactors and LC-MS/MS.

Linlin Zhao1, John B Schenkman, James F Rusling.   

Abstract

An inexpensive, high-throughput genotoxicity screening method was developed by using magnetic particles coated with cytosol/microsome/DNA films as biocolloid reactors in a 96-well plate format coupled with liquid chromatography-mass spectrometry. Incorporation of both microsomal and cytosolic enzymes in the films provides a broad spectrum of metabolic enzymes representing a range of metabolic pathways for bioactivation of chemicals. Reactive metabolites generated via this process are trapped by covalently binding to DNA in the film. The DNA is then hydrolyzed and nucleobase adducts are collected using filters in the bottom for the 96-well plate of analysis by capillary liquid chromatography-tandem mass spectrometry (LC-MS/MS). The magnetic particles facilitate simple and rapid sample preparation and workup. Major DNA adducts from ethylene dibromide, N-acetyl-2-aminofluorene and styrene were identified in proof-of-concept studies. Relative formation rates of DNA adducts correlated well with rodent genotoxicity metric TD(50) for the three compounds. This method has the potential for high-throughput genotoxicity screening, providing chemical structure information that is complementary to toxicity bioassays.

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Year:  2010        PMID: 21090635      PMCID: PMC3005372          DOI: 10.1021/ac102317a

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  35 in total

Review 1.  Applications of mass spectrometry for quantitation of DNA adducts.

Authors:  Hasan Koc; James A Swenberg
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2002-10-05       Impact factor: 3.205

2.  Adenine N3 is a main alkylation site of styrene oxide in double-stranded DNA.

Authors:  M Koskinen; P Vodicka; K Hemminki
Journal:  Chem Biol Interact       Date:  2000-01-03       Impact factor: 5.192

Review 3.  Biologically relevant chemical reactions of N7-alkylguanine residues in DNA.

Authors:  Kent S Gates; Tony Nooner; Sanjay Dutta
Journal:  Chem Res Toxicol       Date:  2004-07       Impact factor: 3.739

Review 4.  Formation and analysis of heterocyclic aromatic amine-DNA adducts in vitro and in vivo.

Authors:  Robert J Turesky; Paul Vouros
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2004-03-25       Impact factor: 3.205

Review 5.  Xenobiotic metabolism: a view through the metabolometer.

Authors:  Andrew D Patterson; Frank J Gonzalez; Jeffrey R Idle
Journal:  Chem Res Toxicol       Date:  2010-05-17       Impact factor: 3.739

6.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

Review 7.  Some current perspectives on chemical carcinogenesis in humans and experimental animals: Presidential Address.

Authors:  E C Miller
Journal:  Cancer Res       Date:  1978-06       Impact factor: 12.701

8.  Evidence for formation of an S-[2-(N7-guanyl)ethyl]glutathione adduct in glutathione-mediated binding of the carcinogen 1,2-dibromoethane to DNA.

Authors:  N Ozawa; F P Guengerich
Journal:  Proc Natl Acad Sci U S A       Date:  1983-09       Impact factor: 11.205

9.  Differentiation of isomeric C8-substituted alkylaniline adducts of guanine by electrospray ionization and tandem quadrupole ion trap mass spectrometry.

Authors:  Linge Li; M Paul Chiarelli; Paula S Branco; Alexandra M Antunes; M Matilde Marques; Luísa L Gonçalves; Frederick A Beland
Journal:  J Am Soc Mass Spectrom       Date:  2003-12       Impact factor: 3.109

Review 10.  Activation of dihaloalkanes by thiol-dependent mechanisms.

Authors:  F Peter Guengerich
Journal:  J Biochem Mol Biol       Date:  2003-01-31
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  13 in total

1.  Electrochemiluminescence Arrays for Studies of Metabolite-related Toxicity.

Authors:  Kiran Bano; James F Rusling
Journal:  Electroanalysis       Date:  2016-06-01       Impact factor: 3.223

2.  High-throughput metabolic genotoxicity screening with a fluidic microwell chip and electrochemiluminescence.

Authors:  Dhanuka P Wasalathanthri; Spundana Malla; Itti Bist; Chi K Tang; Ronaldo C Faria; James F Rusling
Journal:  Lab Chip       Date:  2013-12-07       Impact factor: 6.799

3.  Microfluidic electrochemical array for detection of reactive metabolites formed by cytochrome P450 enzymes.

Authors:  Dhanuka P Wasalathanthri; Vigneshwaran Mani; Chi K Tang; James F Rusling
Journal:  Anal Chem       Date:  2011-11-15       Impact factor: 6.986

4.  Characterizing protein modifications by reactive metabolites using magnetic bead bioreactors and LC-MS/MS.

Authors:  Dandan Li; You-Jun Fu; James F Rusling
Journal:  Chem Commun (Camb)       Date:  2015-03-18       Impact factor: 6.222

5.  Pathways of Metabolite-Related Damage to a Synthetic p53 Gene Exon 7 Oligonucleotide Using Magnetic Enzyme Bioreactor Beads and LC-MS/MS Sequencing.

Authors:  Spundana Malla; Karteek Kadimisetty; Di Jiang; Dharamainder Choudhary; James F Rusling
Journal:  Biochemistry       Date:  2018-05-23       Impact factor: 3.162

6.  Screening reactive metabolites bioactivated by multiple enzyme pathways using a multiplexed microfluidic system.

Authors:  Dhanuka P Wasalathanthri; Ronaldo C Faria; Spundana Malla; Amit A Joshi; John B Schenkman; James F Rusling
Journal:  Analyst       Date:  2012-10-25       Impact factor: 4.616

7.  Genotoxicity-related chemistry of human metabolites of benzo[ghi]perylene (B[ghi]P) investigated using electro-optical arrays and DNA/microsome biocolloid reactors with LC-MS/MS.

Authors:  Shenmin Pan; Dandan Li; Linlin Zhao; John B Schenkman; James F Rusling
Journal:  Chem Res Toxicol       Date:  2013-08-08       Impact factor: 3.739

8.  Organ-Specific Screening for Protein Damage Using Magnetic Bead Bioreactors and LC-MS/MS.

Authors:  Di Jiang; Min Shen; Ben Ahiadu; James F Rusling
Journal:  Anal Chem       Date:  2020-03-24       Impact factor: 6.986

Review 9.  Thin multicomponent films for functional enzyme devices and bioreactor particles.

Authors:  James F Rusling; Dhanuka P Wasalathanthri; John B Schenkman
Journal:  Soft Matter       Date:  2014-11-07       Impact factor: 3.679

10.  Voltammetric microwell array for oxidized guanosine in intact ds-DNA.

Authors:  Boya Song; Shenmin Pan; Chi Tang; Dandan Li; James F Rusling
Journal:  Anal Chem       Date:  2013-10-28       Impact factor: 6.986

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