Literature DB >> 18422888

TILLMore, a resource for the discovery of chemically induced mutants in barley.

Valentina Talamè1, Riccardo Bovina, Maria Corinna Sanguineti, Roberto Tuberosa, Udda Lundqvist, Silvio Salvi.   

Abstract

A sodium azide-mutagenized population of barley (cv. 'Morex') was developed and utilized to identify mutants at target genes using the 'targeting induced local lesions in genomes' (TILLING) procedure. Screening for mutations at four agronomically important genes (HvCO1, Rpg1, eIF4E and NR) identified a total of 22 new mutant alleles, equivalent to the extrapolated rate of one mutation every 374 kb. All mutations except one were G/C to A/T transitions and several (approximately 68%) implied a change in protein amino acid sequence and therefore a possible effect on phenotype. The high rate of mutation detected through TILLING is in keeping with the high frequency (32.7%) of variant phenotypes observed amongst the M(3) families. Our results indicate the feasibility of using this resource for both reverse and forward genetics approaches to investigate gene function in barley and related crops.

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Year:  2008        PMID: 18422888     DOI: 10.1111/j.1467-7652.2008.00341.x

Source DB:  PubMed          Journal:  Plant Biotechnol J        ISSN: 1467-7644            Impact factor:   9.803


  51 in total

Review 1.  Reverse genetics in zebrafish by TILLING.

Authors:  Cecilia B Moens; Thomas M Donn; Emma R Wolf-Saxon; Taylur P Ma
Journal:  Brief Funct Genomic Proteomic       Date:  2008-11-21

2.  TILLING in grass species.

Authors:  Clifford F Weil
Journal:  Plant Physiol       Date:  2009-01       Impact factor: 8.340

3.  The international barley sequencing consortium--at the threshold of efficient access to the barley genome.

Authors:  Daniela Schulte; Timothy J Close; Andreas Graner; Peter Langridge; Takashi Matsumoto; Gary Muehlbauer; Kazuhiro Sato; Alan H Schulman; Robbie Waugh; Roger P Wise; Nils Stein
Journal:  Plant Physiol       Date:  2009-01       Impact factor: 8.340

4.  PCR and sequence analysis of barley chromosome 2H subjected to the gametocidal action of chromosome 2C.

Authors:  Giri Prasad Joshi; Takashi R Endo; Shuhei Nasuda
Journal:  Theor Appl Genet       Date:  2013-06-14       Impact factor: 5.699

5.  Plant Genome Editing and the Relevance of Off-Target Changes.

Authors:  Nathaniel Graham; Gunvant B Patil; David M Bubeck; Raymond C Dobert; Kevin C Glenn; Annie T Gutsche; Sandeep Kumar; John A Lindbo; Luis Maas; Gregory D May; Miguel E Vega-Sanchez; Robert M Stupar; Peter L Morrell
Journal:  Plant Physiol       Date:  2020-05-26       Impact factor: 8.340

6.  Mutagenesis of barley malting quality QTLs with Ds transposons.

Authors:  Surinder Singh; Han Qi Tan; Jaswinder Singh
Journal:  Funct Integr Genomics       Date:  2011-11-22       Impact factor: 3.410

7.  Production of a high-efficiency TILLING population through polyploidization.

Authors:  Helen Tsai; Victor Missirian; Kathie J Ngo; Robert K Tran; Simon R Chan; Venkatesan Sundaresan; Luca Comai
Journal:  Plant Physiol       Date:  2013-02-15       Impact factor: 8.340

8.  Forward and reverse genetics of rapid-cycling Brassica oleracea.

Authors:  Edward Himelblau; Erin J Gilchrist; Kelly Buono; Colleen Bizzell; Laurie Mentzer; Robert Vogelzang; Thomas Osborn; Richard M Amasino; Isobel A P Parkin; George W Haughn
Journal:  Theor Appl Genet       Date:  2009-01-09       Impact factor: 5.699

9.  TILLING in the two-rowed barley cultivar 'Barke' reveals preferred sites of functional diversity in the gene HvHox1.

Authors:  Sven Gottwald; Petra Bauer; Takao Komatsuda; Udda Lundqvist; Nils Stein
Journal:  BMC Res Notes       Date:  2009-12-17

10.  A high-density collection of EMS-induced mutations for TILLING in Landsberg erecta genetic background of Arabidopsis.

Authors:  Beatriz Martín; Mercedes Ramiro; José M Martínez-Zapater; Carlos Alonso-Blanco
Journal:  BMC Plant Biol       Date:  2009-12-14       Impact factor: 4.215

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