Literature DB >> 19132334

Forward and reverse genetics of rapid-cycling Brassica oleracea.

Edward Himelblau1, Erin J Gilchrist, Kelly Buono, Colleen Bizzell, Laurie Mentzer, Robert Vogelzang, Thomas Osborn, Richard M Amasino, Isobel A P Parkin, George W Haughn.   

Abstract

Seeds of rapid-cycling Brassica oleracea were mutagenized with the chemical mutagen, ethylmethane sulfonate. The reverse genetics technique, TILLING, was used on a sample population of 1,000 plants, to determine the mutation profile. The spectrum and frequency of mutations induced by ethylmethane sulfonate was similar to that seen in other diploid species such as Arabidopsis thaliana. These data indicate that the mutagenesis was effective and demonstrate that TILLING represents an efficient reverse genetic technique in B. oleracea that will become more valuable as increasing genomic sequence data become available for this species. The extensive duplication in the B. oleracea genome is believed to result in the genetic redundancy that has been important for the evolution of morphological diversity seen in today's B. oleracea crops (broccoli, Brussels sprouts, cauliflower, cabbage, kale and kohlrabi). However, our forward genetic screens identified 120 mutants in which some aspect of development was affected. Some of these lines have been characterized genetically and in the majority of these, the mutant trait segregates as a recessive allele affecting a single locus. One dominant mutation (curly leaves) and one semi-dominant mutation (dwarf-like) were also identified. Allelism tests of two groups of mutants (glossy and dwarf) revealed that for some loci, multiple independent alleles have been identified. These data indicate that, despite genetic redundancy, mutation of many individual loci in B. oleracea results in distinct phenotypes.

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Year:  2009        PMID: 19132334     DOI: 10.1007/s00122-008-0952-7

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  25 in total

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Review 2.  Gibberellin signaling: biosynthesis, catabolism, and response pathways.

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3.  Large-scale discovery of induced point mutations with high-throughput TILLING.

Authors:  Bradley J Till; Steven H Reynolds; Elizabeth A Greene; Christine A Codomo; Linda C Enns; Jessica E Johnson; Chris Burtner; Anthony R Odden; Kim Young; Nicholas E Taylor; Jorja G Henikoff; Luca Comai; Steven Henikoff
Journal:  Genome Res       Date:  2003-03       Impact factor: 9.043

Review 4.  Biosynthesis and secretion of plant cuticular wax.

Authors:  L Kunst; A L Samuels
Journal:  Prog Lipid Res       Date:  2003-01       Impact factor: 16.195

5.  A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome.

Authors:  Guillaume Blanc; Karsten Hokamp; Kenneth H Wolfe
Journal:  Genome Res       Date:  2003-02       Impact factor: 9.043

6.  Mismatch cleavage by single-strand specific nucleases.

Authors:  Bradley J Till; Chris Burtner; Luca Comai; Steven Henikoff
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7.  The origin of subfunctions and modular gene regulation.

Authors:  Allan Force; William A Cresko; F Bryan Pickett; Steven R Proulx; Chris Amemiya; Michael Lynch
Journal:  Genetics       Date:  2005-03-21       Impact factor: 4.562

8.  Rapid-cycling populations of brassica.

Authors:  P H Williams; C B Hill
Journal:  Science       Date:  1986-06-13       Impact factor: 47.728

9.  Genome duplication in soybean (Glycine subgenus soja).

Authors:  R C Shoemaker; K Polzin; J Labate; J Specht; E C Brummer; T Olson; N Young; V Concibido; J Wilcox; J P Tamulonis; G Kochert; H R Boerma
Journal:  Genetics       Date:  1996-09       Impact factor: 4.562

10.  Discovery of chemically induced mutations in rice by TILLING.

Authors:  Bradley J Till; Jennifer Cooper; Thomas H Tai; Peter Colowit; Elizabeth A Greene; Steven Henikoff; Luca Comai
Journal:  BMC Plant Biol       Date:  2007-04-11       Impact factor: 4.215

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  16 in total

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Authors:  Hans-Joachim Harloff; Susanne Lemcke; Juliane Mittasch; Andrej Frolov; Jian Guo Wu; Felix Dreyer; Gunhild Leckband; Christian Jung
Journal:  Theor Appl Genet       Date:  2011-12-24       Impact factor: 5.699

2.  iTILLING: a personalized approach to the identification of induced mutations in Arabidopsis.

Authors:  Susan M Bush; Patrick J Krysan
Journal:  Plant Physiol       Date:  2010-07-28       Impact factor: 8.340

3.  A rich TILLING resource for studying gene function in Brassica rapa.

Authors:  Pauline Stephenson; David Baker; Thomas Girin; Amandine Perez; Stephen Amoah; Graham J King; Lars Østergaard
Journal:  BMC Plant Biol       Date:  2010-04-09       Impact factor: 4.215

4.  Genetic analysis of potassium use efficiency in Brassica oleracea.

Authors:  P J White; J P Hammond; G J King; H C Bowen; R M Hayden; M C Meacham; W P Spracklen; M R Broadley
Journal:  Ann Bot       Date:  2009-10-08       Impact factor: 4.357

5.  KNOX1 genes regulate lignin deposition and composition in monocots and dicots.

Authors:  Brad T Townsley; Neelima R Sinha; Julie Kang
Journal:  Front Plant Sci       Date:  2013-05-03       Impact factor: 5.753

6.  sunTILL: a TILLING resource for gene function analysis in sunflower.

Authors:  Wilma Sabetta; Vittorio Alba; Antonio Blanco; Cinzia Montemurro
Journal:  Plant Methods       Date:  2011-06-30       Impact factor: 4.993

Review 7.  TILLING: a shortcut in functional genomics.

Authors:  Marzena Kurowska; Agata Daszkowska-Golec; Damian Gruszka; Marek Marzec; Miriam Szurman; Iwona Szarejko; Miroslaw Maluszynski
Journal:  J Appl Genet       Date:  2011-09-13       Impact factor: 3.240

8.  Towards a TILLING platform for functional genomics in Piel de Sapo melons.

Authors:  Mireia González; Meihong Xu; Cristina Esteras; Cristina Roig; Antonio J Monforte; Christelle Troadec; Marta Pujol; Fernando Nuez; Abdelhafid Bendahmane; Jordi Garcia-Mas; Belén Picó
Journal:  BMC Res Notes       Date:  2011-08-11

9.  Mutagenesis as a tool in plant genetics, functional genomics, and breeding.

Authors:  Per Sikora; Aakash Chawade; Mikael Larsson; Johanna Olsson; Olof Olsson
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10.  A high-density collection of EMS-induced mutations for TILLING in Landsberg erecta genetic background of Arabidopsis.

Authors:  Beatriz Martín; Mercedes Ramiro; José M Martínez-Zapater; Carlos Alonso-Blanco
Journal:  BMC Plant Biol       Date:  2009-12-14       Impact factor: 4.215

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