Literature DB >> 18418692

Bidirectional expression of the SCA8 expansion mutation: one mutation, two genes.

Yoshio Ikeda1, Randy S Daughters, Laura P W Ranum.   

Abstract

Spinocerebellar ataxia type 8 (SCA8) is a dominantly inherited, slowly progressive neurodegenerative disorder caused by a CTG.CAG repeat expansion located on chromosome 13q21. The expansion mutation was isolated directly from the DNA of a single patient using RAPID cloning and subsequently shown to co-segregate with disease in additional ataxia families including a seven-generation kindred (the MN-A family). The size-dependent penetrance of the repeat found in the large MN-A kindred makes it appear as though some parts of the family have a dominant disorder while other parts of this same family have recessive or sporadic forms of ataxia. While the linkage and size-dependent penetrance of the SCA8 CTG.CAG expansion in the MN-A family argue that the SCA8 expansion causes ataxia, the reduced penetrance in other SCA8 families and the discovery of expansions in the general population have led to a controversy surrounding whether or not the SCA8 expansion is pathogenic. A recently reported mouse model in which SCA8 BAC-expansion but not BAC-control lines develop a progressive neurological phenotype now demonstrates the pathogenicity of the (CTG.CAG)(n) expansion. These mice show a loss of cerebellar GABAergic inhibition and, similar to human patients, have 1C2-positive intranuclear inclusions in Purkinje cells and other neurons. Additional studies demonstrate that the SCA8 expansion is expressed in both directions (CUG and CAG) and that a novel gene expressed in the CAG direction encodes a pure polyglutamine expansion protein (ataxin 8, ATXN8). Moreover, the expression of non-coding (CUG)(n) expansion transcripts (ataxin 8 opposite strand, ATXN8OS) and the discovery of intranuclear polyglutamine inclusions suggest SCA8 pathogenesis may involve toxic gain-of-function mechanisms at both the protein and RNA levels. Our data, combined with the recently reported antisense transcripts spanning the DM1 repeat expansion in the CAG direction and the growing number of reports of antisense transcripts expressed throughout the mammalian genome, raises the possibility that bidirectional expression across pathogenic microsatellite expansions may occur in other expansion disorders, and that potential pathogenic effects of mutations expressed from both strands should be considered.

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Year:  2008        PMID: 18418692     DOI: 10.1007/s12311-008-0010-7

Source DB:  PubMed          Journal:  Cerebellum        ISSN: 1473-4222            Impact factor:   3.847


  37 in total

1.  SCA8 repeat expansion coexists with SCA1--not only with SCA6.

Authors:  Anna Sulek; Dorota Hoffman-Zacharska; Elzbieta Zdzienicka; Jacek Zaremba
Journal:  Am J Hum Genet       Date:  2003-10       Impact factor: 11.025

2.  Bidirectional expression of CUG and CAG expansion transcripts and intranuclear polyglutamine inclusions in spinocerebellar ataxia type 8.

Authors:  Melinda L Moseley; Tao Zu; Yoshio Ikeda; Wangcai Gao; Anne K Mosemiller; Randy S Daughters; Gang Chen; Marcy R Weatherspoon; H Brent Clark; Timothy J Ebner; John W Day; Laura P W Ranum
Journal:  Nat Genet       Date:  2006-06-25       Impact factor: 38.330

3.  The KLHL1-antisense transcript ( KLHL1AS) is evolutionarily conserved.

Authors:  Kellie A Benzow; Michael D Koob
Journal:  Mamm Genome       Date:  2002-03       Impact factor: 2.957

4.  SCA8 CTG repeat: en masse contractions in sperm and intergenerational sequence changes may play a role in reduced penetrance.

Authors:  M L Moseley; L J Schut; T D Bird; M D Koob; J W Day; L P Ranum
Journal:  Hum Mol Genet       Date:  2000-09-01       Impact factor: 6.150

5.  High germinal instability of the (CTG)n at the SCA8 locus of both expanded and normal alleles.

Authors:  I Silveira; I Alonso; L Guimarães; P Mendonça; C Santos; P Maciel; J M Fidalgo De Matos; M Costa; C Barbot; A Tuna; J Barros; L Jardim; P Coutinho; J Sequeiros
Journal:  Am J Hum Genet       Date:  2000-03       Impact factor: 11.025

6.  Long repeat tracts at SCA8 in major psychosis.

Authors:  J B Vincent; Q P Yuan; M Schalling; R Adolfsson; M H Azevedo; A Macedo; A Bauer; C DallaTorre; H M Medeiros; M T Pato; C N Pato; T Bowen; C A Guy; M J Owen; M C O'Donovan; A D Paterson; A Petronis; J L Kennedy
Journal:  Am J Med Genet       Date:  2000-12-04

7.  Molecular and clinical analyses of spinocerebellar ataxia type 8 in Japan.

Authors:  Y Ikeda; M Shizuka; M Watanabe; K Okamoto; M Shoji
Journal:  Neurology       Date:  2000-02-22       Impact factor: 9.910

8.  Rapid cloning of expanded trinucleotide repeat sequences from genomic DNA.

Authors:  M D Koob; K A Benzow; T D Bird; J W Day; M L Moseley; L P Ranum
Journal:  Nat Genet       Date:  1998-01       Impact factor: 38.330

9.  The spinocerebellar ataxia 8 noncoding RNA causes neurodegeneration and associates with staufen in Drosophila.

Authors:  Mousumi Mutsuddi; Cameron M Marshall; Kellie A Benzow; Michael D Koob; Ilaria Rebay
Journal:  Curr Biol       Date:  2004-02-17       Impact factor: 10.834

10.  Spinocerebellar ataxia type 8: molecular genetic comparisons and haplotype analysis of 37 families with ataxia.

Authors:  Yoshio Ikeda; Joline C Dalton; Melinda L Moseley; Kathy L Gardner; Thomas D Bird; Tetsuo Ashizawa; William K Seltzer; Massimo Pandolfo; Aubrey Milunsky; Nicholas T Potter; Mikio Shoji; John B Vincent; John W Day; Laura P W Ranum
Journal:  Am J Hum Genet       Date:  2004-05-19       Impact factor: 11.025

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  37 in total

1.  Aryl hydrocarbon receptor gene transitions (c.-742C>T; c.1661G>A) and idiopathic male infertility: a case-control study with in silico and meta-analysis.

Authors:  Younes Aftabi; Abasalt Hosseinzadeh Colagar; Faramarz Mehrnejad; Ensiyeh Seyedrezazadeh; Emadoddin Moudi
Journal:  Environ Sci Pollut Res Int       Date:  2017-07-15       Impact factor: 4.223

Review 2.  Clinical neurogenetics: autosomal dominant spinocerebellar ataxia.

Authors:  Vikram G Shakkottai; Brent L Fogel
Journal:  Neurol Clin       Date:  2013-07-30       Impact factor: 3.806

Review 3.  The biological effects of simple tandem repeats: lessons from the repeat expansion diseases.

Authors:  Karen Usdin
Journal:  Genome Res       Date:  2008-07       Impact factor: 9.043

4.  Spinocerebellar ataxias type 8, 12, and 17 and dentatorubro-pallidoluysian atrophy in Czech ataxic patients.

Authors:  Zuzana Musova; Zdenek Sedlacek; Radim Mazanec; Jiri Klempir; Jan Roth; Pavlina Plevova; Martin Vyhnalek; Marta Kopeckova; Ludmila Apltova; Anna Krepelova; Alena Zumrova
Journal:  Cerebellum       Date:  2013-04       Impact factor: 3.847

Review 5.  Expanded complexity of unstable repeat diseases.

Authors:  Urszula Polak; Elizabeth McIvor; Sharon Y R Dent; Robert D Wells; Marek Napierala
Journal:  Biofactors       Date:  2012-12-11       Impact factor: 6.113

Review 6.  Spinocerebellar ataxias: prospects and challenges for therapy development.

Authors:  Tetsuo Ashizawa; Gülin Öz; Henry L Paulson
Journal:  Nat Rev Neurol       Date:  2018-10       Impact factor: 42.937

Review 7.  Partners in crime: bidirectional transcription in unstable microsatellite disease.

Authors:  Ranjan Batra; Konstantinos Charizanis; Maurice S Swanson
Journal:  Hum Mol Genet       Date:  2010-04-04       Impact factor: 6.150

Review 8.  Chromatin changes in the development and pathology of the Fragile X-associated disorders and Friedreich ataxia.

Authors:  Daman Kumari; Rachel Lokanga; Dmitry Yudkin; Xiao-Nan Zhao; Karen Usdin
Journal:  Biochim Biophys Acta       Date:  2012-01-05

9.  Genetic and clinical analyses of spinocerebellar ataxia type 8 in mainland China.

Authors:  Yao Zhou; Yanchun Yuan; Zhen Liu; Sheng Zeng; Zhao Chen; Lu Shen; Hong Jiang; Kun Xia; Beisha Tang; Junling Wang
Journal:  J Neurol       Date:  2019-08-30       Impact factor: 4.849

10.  "Genes".

Authors:  Sonja J Prohaska; Peter F Stadler
Journal:  Theory Biosci       Date:  2008-03-05       Impact factor: 1.919

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