Literature DB >> 23233240

Expanded complexity of unstable repeat diseases.

Urszula Polak1, Elizabeth McIvor, Sharon Y R Dent, Robert D Wells, Marek Napierala.   

Abstract

Unstable repeat diseases (URDs) share a common mutational phenomenon of changes in the copy number of short, tandemly repeated DNA sequences. More than 20 human neurological diseases are caused by instability, predominantly, expansion of microsatellite sequences. Changes in the repeat size initiate a cascade of pathological processes, frequently characteristic of a unique disease or a small subgroup of the URDs. Understanding of both the mechanism of repeat instability and molecular consequences of the repeat expansions is critical to developing successful therapies for these diseases. Recent technological breakthroughs in whole genome, transcriptome and proteome analyses will almost certainly lead to new discoveries regarding the mechanisms of repeat instability, the pathogenesis of URDs, and will facilitate development of novel therapeutic approaches. The aim of this review is to give a general overview of unstable repeats diseases, highlight the complexities of these diseases, and feature the emerging discoveries in the field.
Copyright © 2012 International Union of Biochemistry and Molecular Biology, Inc.

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Year:  2012        PMID: 23233240      PMCID: PMC4648362          DOI: 10.1002/biof.1060

Source DB:  PubMed          Journal:  Biofactors        ISSN: 0951-6433            Impact factor:   6.113


  119 in total

1.  Transcription-induced cleavage of immunoglobulin switch regions by nucleotide excision repair nucleases in vitro.

Authors:  M Tian; F W Alt
Journal:  J Biol Chem       Date:  2000-08-04       Impact factor: 5.157

2.  Instability of highly expanded CAG repeats in mice transgenic for the Huntington's disease mutation.

Authors:  L Mangiarini; K Sathasivam; A Mahal; R Mott; M Seller; G P Bates
Journal:  Nat Genet       Date:  1997-02       Impact factor: 38.330

3.  Mismatch repair in Escherichia coli enhances instability of (CTG)n triplet repeats from human hereditary diseases.

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Journal:  Proc Natl Acad Sci U S A       Date:  1995-11-21       Impact factor: 11.205

4.  Progressive GAA.TTC repeat expansion in human cell lines.

Authors:  Scott Ditch; Mimi C Sammarco; Ayan Banerjee; Ed Grabczyk
Journal:  PLoS Genet       Date:  2009-10-30       Impact factor: 5.917

5.  Characterization of Human Huntington's Disease Cell Model from Induced Pluripotent Stem Cells.

Authors:  Ningzhe Zhang; Mahru C An; Daniel Montoro; Lisa M Ellerby
Journal:  PLoS Curr       Date:  2010-10-28

Review 6.  Transcription destabilizes triplet repeats.

Authors:  Yunfu Lin; Leroy Hubert; John H Wilson
Journal:  Mol Carcinog       Date:  2009-04       Impact factor: 4.784

7.  Expansion and deletion of CTG repeats from human disease genes are determined by the direction of replication in E. coli.

Authors:  S Kang; A Jaworski; K Ohshima; R D Wells
Journal:  Nat Genet       Date:  1995-06       Impact factor: 38.330

8.  A genetic defect caused by a triplet repeat expansion in Arabidopsis thaliana.

Authors:  Sridevi Sureshkumar; Marco Todesco; Korbinian Schneeberger; Ramya Harilal; Sureshkumar Balasubramanian; Detlef Weigel
Journal:  Science       Date:  2009-01-15       Impact factor: 47.728

Review 9.  Trinucleotide repeat DNA structures: dynamic mutations from dynamic DNA.

Authors:  C E Pearson; R R Sinden
Journal:  Curr Opin Struct Biol       Date:  1998-06       Impact factor: 6.809

10.  Expanded CAG/CTG repeat DNA induces a checkpoint response that impacts cell proliferation in Saccharomyces cerevisiae.

Authors:  Rangapriya Sundararajan; Catherine H Freudenreich
Journal:  PLoS Genet       Date:  2011-03-17       Impact factor: 5.917

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  10 in total

Review 1.  DNA triplet repeat expansion and mismatch repair.

Authors:  Ravi R Iyer; Anna Pluciennik; Marek Napierala; Robert D Wells
Journal:  Annu Rev Biochem       Date:  2015-01-02       Impact factor: 23.643

2.  Excision of Expanded GAA Repeats Alleviates the Molecular Phenotype of Friedreich's Ataxia.

Authors:  Yanjie Li; Urszula Polak; Angela D Bhalla; Natalia Rozwadowska; Jill Sergesketter Butler; David R Lynch; Sharon Y R Dent; Marek Napierala
Journal:  Mol Ther       Date:  2015-03-11       Impact factor: 11.454

3.  Atypical structures of GAA/TTC trinucleotide repeats underlying Friedreich's ataxia: DNA triplexes and RNA/DNA hybrids.

Authors:  Jiahui Zhang; Ashkan Fakharzadeh; Feng Pan; Christopher Roland; Celeste Sagui
Journal:  Nucleic Acids Res       Date:  2020-09-25       Impact factor: 16.971

4.  Weak association of glyoxalase 1 (GLO1) variants with autism spectrum disorder.

Authors:  Jernej Kovač; Katarina Trebušak Podkrajšek; Marta Macedoni Lukšič; Tadej Battelino
Journal:  Eur Child Adolesc Psychiatry       Date:  2014-03-27       Impact factor: 4.785

5.  Establishment and Maintenance of Primary Fibroblast Repositories for Rare Diseases-Friedreich's Ataxia Example.

Authors:  Yanjie Li; Urszula Polak; Amanda D Clark; Angela D Bhalla; Yu-Yun Chen; Jixue Li; Jennifer Farmer; Lauren Seyer; David Lynch; Jill S Butler; Marek Napierala
Journal:  Biopreserv Biobank       Date:  2016-03-22       Impact factor: 2.300

6.  Friedreich's ataxia--a case of aberrant transcription termination?

Authors:  Jill Sergesketter Butler; Marek Napierala
Journal:  Transcription       Date:  2015-04-01

Review 7.  RNA-mediated pathogenic mechanisms in polyglutamine diseases and amyotrophic lateral sclerosis.

Authors:  Ho Yin Edwin Chan
Journal:  Front Cell Neurosci       Date:  2014-12-19       Impact factor: 5.505

Review 8.  Drosophila melanogaster As a Model Organism to Study RNA Toxicity of Repeat Expansion-Associated Neurodegenerative and Neuromuscular Diseases.

Authors:  Alex C Koon; Ho Yin Edwin Chan
Journal:  Front Cell Neurosci       Date:  2017-03-21       Impact factor: 5.505

9.  A microsatellite repeat in PCA3 long non-coding RNA is associated with prostate cancer risk and aggressiveness.

Authors:  John Lai; Leire Moya; Jiyuan An; Andrea Hoffman; Srilakshmi Srinivasan; Janaththani Panchadsaram; Carina Walpole; Joanna L Perry-Keene; Suzanne Chambers; Melanie L Lehman; Colleen C Nelson; Judith A Clements; Jyotsna Batra
Journal:  Sci Rep       Date:  2017-12-04       Impact factor: 4.379

Review 10.  Structural studies of CNG repeats.

Authors:  Agnieszka Kiliszek; Wojciech Rypniewski
Journal:  Nucleic Acids Res       Date:  2014-06-17       Impact factor: 16.971

  10 in total

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