Literature DB >> 18351373

Amelogenin sex determination by pyrosequencing of short PCR products.

Frank Tschentscher1, Ulrich H Frey, Thomas Bajanowski.   

Abstract

We developed an assay, which allows the sex determination of human DNA samples by pyrosequencing of short PCR products. A 48/45-bp stretch including primers of the amelogenin gene with a 3-bp insertion on the Y chromosome was chosen for analysis. In an initial study, we correctly typed 50 male and 50 female DNA samples from unrelated donors. First experiments with forensic samples, which failed in conventional analyses, indicate that this approach might be an advantage when dealing with degraded DNA.

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Year:  2008        PMID: 18351373     DOI: 10.1007/s00414-008-0228-4

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  13 in total

1.  Is the amelogenin sex test valid?

Authors:  B Brinkmann
Journal:  Int J Legal Med       Date:  2002-04       Impact factor: 2.686

2.  Rare failures in the amelogenin sex test.

Authors:  M Steinlechner; B Berger; H Niederstätter; W Parson
Journal:  Int J Legal Med       Date:  2002-04       Impact factor: 2.686

3.  Quantification of allele-specific G-protein beta3 subunit mRNA transcripts in different human cells and tissues by Pyrosequencing.

Authors:  Aijun Sun; Junbo Ge; Winfried Siffert; Ulrich H Frey
Journal:  Eur J Hum Genet       Date:  2005-03       Impact factor: 4.246

4.  Species identification by means of pyrosequencing the mitochondrial 12S rRNA gene.

Authors:  B Balitzki-Korte; K Anslinger; C Bartsch; B Rolf
Journal:  Int J Legal Med       Date:  2005-05-04       Impact factor: 2.686

Review 5.  Pyrosequencing: history, biochemistry and future.

Authors:  Afshin Ahmadian; Maria Ehn; Sophia Hober
Journal:  Clin Chim Acta       Date:  2005-09-13       Impact factor: 3.786

Review 6.  DNA Commission of the International Society of Forensic Genetics (ISFG): an update of the recommendations on the use of Y-STRs in forensic analysis.

Authors:  L Gusmão; J M Butler; A Carracedo; P Gill; M Kayser; W R Mayr; N Morling; M Prinz; L Roewer; C Tyler-Smith; P M Schneider
Journal:  Int J Legal Med       Date:  2006-07       Impact factor: 2.686

7.  Reliability of DNA-based sex tests.

Authors:  F R Santos; A Pandya; C Tyler-Smith
Journal:  Nat Genet       Date:  1998-02       Impact factor: 38.330

8.  A rapid and quantitative DNA sex test: fluorescence-based PCR analysis of X-Y homologous gene amelogenin.

Authors:  K M Sullivan; A Mannucci; C P Kimpton; P Gill
Journal:  Biotechniques       Date:  1993-10       Impact factor: 1.993

9.  Quantification of G protein Gaalphas subunit splice variants in different human tissues and cells using pyrosequencing.

Authors:  Ulrich H Frey; Holger Nückel; Dobromir Dobrev; Iris Manthey; I E Sandalcioglu; Andreas Eisenhardt; Karl Worm; Hans Hauner; Winfried Siffert
Journal:  Gene Expr       Date:  2005

10.  Deletions in the Y-derived amelogenin gene fragment in the Indian population.

Authors:  V K Kashyap; Sanghamitra Sahoo; T Sitalaximi; R Trivedi
Journal:  BMC Med Genet       Date:  2006-04-10       Impact factor: 2.103

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  9 in total

1.  Pyrosequencing of a short fragment of the amelogenin gene for gender identification.

Authors:  Shujin Li; Ting Feng; Lihong Fu; Zhenhua Li; Chunguang Lou; Xiaojing Zhang; Chunling Ma; Bin Cong
Journal:  Mol Biol Rep       Date:  2012-02-05       Impact factor: 2.316

2.  "GenderPlex" a PCR multiplex for reliable gender determination of degraded human DNA samples and complex gender constellations.

Authors:  Anna Esteve Codina; Harald Niederstätter; Walther Parson
Journal:  Int J Legal Med       Date:  2008-12-17       Impact factor: 2.686

3.  Development of SNP-based human identification system.

Authors:  Jae-Jung Kim; Bok-Ghee Han; Hae-In Lee; Han-Wook Yoo; Jong-Keuk Lee
Journal:  Int J Legal Med       Date:  2010-03       Impact factor: 2.686

4.  A novel method of male sex identification of human ancient skeletal remains.

Authors:  María Teresa Navarro-Romero; María de Lourdes Muñoz; Enrique Alcala-Castañeda; Eladio Terreros-Espinosa; Eduardo Domínguez-de-la-Cruz; Normand García-Hernández; Miguel Ángel Moreno-Galeana
Journal:  Chromosome Res       Date:  2020-07-03       Impact factor: 5.239

5.  A qPCR-duplex assay for sex determination in ancient DNA.

Authors:  Anna Poma; Patrizia Cesare; Antonella Bonfigli; Anna Rita Volpe; Sabrina Colafarina; Giulia Vecchiotti; Alfonso Forgione; Osvaldo Zarivi
Journal:  PLoS One       Date:  2022-06-10       Impact factor: 3.752

6.  Sex determination from buccal mucosa scrapes.

Authors:  Tushar Mittal; K Muralidhar Saralaya; Ajee Kuruvilla; Chandrayya Achary
Journal:  Int J Legal Med       Date:  2008-09-24       Impact factor: 2.686

7.  Determination of sex by exfoliative cytology using acridine orange confocal microscopy: A short study.

Authors:  D Shyam Prasad Reddy; Herald J Sherlin; Pratibha Ramani; P Ajay Prakash
Journal:  J Forensic Dent Sci       Date:  2012-07

8.  Sex determination in highly fragmented human DNA by high-resolution melting (HRM) analysis.

Authors:  Brenda A Álvarez-Sandoval; Linda R Manzanilla; Rafael Montiel
Journal:  PLoS One       Date:  2014-08-06       Impact factor: 3.240

9.  Genetic sex determination assays in 53 mammalian species: Literature analysis and guidelines for reporting standardization.

Authors:  Karin Hrovatin; Tanja Kunej
Journal:  Ecol Evol       Date:  2017-12-13       Impact factor: 2.912

  9 in total

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