Literature DB >> 18347332

Surprising migration and population size dynamics in ancient Iberian brown bears (Ursus arctos).

Cristina E Valdiosera1, José Luis García-Garitagoitia, Nuria Garcia, Ignacio Doadrio, Mark G Thomas, Catherine Hänni, Juan-Luis Arsuaga, Ian Barnes, Michael Hofreiter, Ludovic Orlando, Anders Götherström.   

Abstract

The endangered brown bear populations (Ursus arctos) in Iberia have been suggested to be the last fragments of the brown bear population that served as recolonization stock for large parts of Europe during the Pleistocene. Conservation efforts are intense, and results are closely monitored. However, the efforts are based on the assumption that the Iberian bears are a unique unit that has evolved locally for an extended period. We have sequenced mitochondrial DNA (mtDNA) from ancient Iberian bear remains and analyzed them as a serial dataset, monitoring changes in diversity and occurrence of European haplogroups over time. Using these data, we show that the Iberian bear population has experienced a dynamic, recent evolutionary history. Not only has the population undergone mitochondrial gene flow from other European brown bears, but the effective population size also has fluctuated substantially. We conclude that the Iberian bear population has been a fluid evolutionary unit, developed by gene flow from other populations and population bottlenecks, far from being in genetic equilibrium or isolated from other brown bear populations. Thus, the current situation is highly unusual and the population may in fact be isolated for the first time in its history.

Entities:  

Mesh:

Year:  2008        PMID: 18347332      PMCID: PMC2278212          DOI: 10.1073/pnas.0712223105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

1.  Bayesian inference of phylogeny and its impact on evolutionary biology.

Authors:  J P Huelsenbeck; F Ronquist; R Nielsen; J P Bollback
Journal:  Science       Date:  2001-12-14       Impact factor: 47.728

2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

3.  Serial SimCoal: a population genetics model for data from multiple populations and points in time.

Authors:  Christian N K Anderson; Uma Ramakrishnan; Yvonne L Chan; Elizabeth A Hadly
Journal:  Bioinformatics       Date:  2004-11-25       Impact factor: 6.937

4.  Detecting past population bottlenecks using temporal genetic data.

Authors:  Uma Ramakrishnan; Elizabeth A Hadly; Joanna L Mountain
Journal:  Mol Ecol       Date:  2005-09       Impact factor: 6.185

5.  LAMARC 2.0: maximum likelihood and Bayesian estimation of population parameters.

Authors:  Mary K Kuhner
Journal:  Bioinformatics       Date:  2006-01-12       Impact factor: 6.937

6.  Ancient DNA and the population genetics of cave bears (Ursus spelaeus) through space and time.

Authors:  Ludovic Orlando; Dominique Bonjean; Herve Bocherens; Aurelie Thenot; Alain Argant; Marcel Otte; Catherine Hänni
Journal:  Mol Biol Evol       Date:  2002-11       Impact factor: 16.240

7.  Dynamics of Pleistocene population extinctions in Beringian brown bears.

Authors:  I Barnes; P Matheus; B Shapiro; D Jensen; A Cooper
Journal:  Science       Date:  2002-03-22       Impact factor: 47.728

8.  Human remains from Valdegoba Cave (Huérmeces, Burgos, Spain).

Authors:  R M Quam; J L Arsuaga; J M Bermúdez de Castro; C J Díez; C Lorenzo; J M Carretero; N García; A I Ortega
Journal:  J Hum Evol       Date:  2001-11       Impact factor: 3.895

9.  Population genetics of ice age brown bears.

Authors:  J A Leonard; R K Wayne; A Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

10.  Staying out in the cold: glacial refugia and mitochondrial DNA phylogeography in ancient European brown bears.

Authors:  Cristina E Valdiosera; Nuria García; Cecilia Anderung; Love Dalén; Evelyne Crégut-Bonnoure; Ralf-Dietrich Kahlke; Mathias Stiller; Mikael Brandström; Mark G Thomas; Juan Luis Arsuaga; Anders Götherström; Ian Barnes
Journal:  Mol Ecol       Date:  2007-11-21       Impact factor: 6.185

View more
  25 in total

1.  A Bayesian phylogenetic method to estimate unknown sequence ages.

Authors:  Beth Shapiro; Simon Y W Ho; Alexei J Drummond; Marc A Suchard; Oliver G Pybus; Andrew Rambaut
Journal:  Mol Biol Evol       Date:  2010-10-01       Impact factor: 16.240

2.  How robust are "isolation with migration" analyses to violations of the im model? A simulation study.

Authors:  Jared L Strasburg; Loren H Rieseberg
Journal:  Mol Biol Evol       Date:  2009-09-30       Impact factor: 16.240

3.  Population dynamic of the extinct European aurochs: genetic evidence of a north-south differentiation pattern and no evidence of post-glacial expansion.

Authors:  Stefano Mona; Giulio Catalano; Martina Lari; Greger Larson; Paolo Boscato; Antonella Casoli; Luca Sineo; Carolina Di Patti; Elena Pecchioli; David Caramelli; Giorgio Bertorelle
Journal:  BMC Evol Biol       Date:  2010-03-26       Impact factor: 3.260

4.  Decline and recovery of a large carnivore: environmental change and long-term trends in an endangered brown bear population.

Authors:  Isabel Martínez Cano; Fernando González Taboada; Javier Naves; Alberto Fernández-Gil; Thorsten Wiegand
Journal:  Proc Biol Sci       Date:  2016-11-30       Impact factor: 5.349

5.  Patterns of East Asian pig domestication, migration, and turnover revealed by modern and ancient DNA.

Authors:  Greger Larson; Ranran Liu; Xingbo Zhao; Jing Yuan; Dorian Fuller; Loukas Barton; Keith Dobney; Qipeng Fan; Zhiliang Gu; Xiao-Hui Liu; Yunbing Luo; Peng Lv; Leif Andersson; Ning Li
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-19       Impact factor: 11.205

6.  Diversity lost: are all Holarctic large mammal species just relict populations?

Authors:  Michael Hofreiter; Ian Barnes
Journal:  BMC Biol       Date:  2010-04-21       Impact factor: 7.431

7.  Demographic loss, genetic structure and the conservation implications for Indian tigers.

Authors:  Samrat Mondol; Michael W Bruford; Uma Ramakrishnan
Journal:  Proc Biol Sci       Date:  2013-05-15       Impact factor: 5.349

8.  Survival and divergence in a small group: The extraordinary genomic history of the endangered Apennine brown bear stragglers.

Authors:  Andrea Benazzo; Emiliano Trucchi; James A Cahill; Pierpaolo Maisano Delser; Stefano Mona; Matteo Fumagalli; Lynsey Bunnefeld; Luca Cornetti; Silvia Ghirotto; Matteo Girardi; Lino Ometto; Alex Panziera; Omar Rota-Stabelli; Enrico Zanetti; Alexandros Karamanlidis; Claudio Groff; Ladislav Paule; Leonardo Gentile; Carles Vilà; Saverio Vicario; Luigi Boitani; Ludovic Orlando; Silvia Fuselli; Cristiano Vernesi; Beth Shapiro; Paolo Ciucci; Giorgio Bertorelle
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-24       Impact factor: 11.205

9.  Relict or colonizer? Extinction and range expansion of penguins in southern New Zealand.

Authors:  Sanne Boessenkool; Jeremy J Austin; Trevor H Worthy; Paul Scofield; Alan Cooper; Philip J Seddon; Jonathan M Waters
Journal:  Proc Biol Sci       Date:  2009-03-07       Impact factor: 5.349

10.  Using classical population genetics tools with heterochroneous data: time matters!

Authors:  Frantz Depaulis; Ludovic Orlando; Catherine Hänni
Journal:  PLoS One       Date:  2009-05-14       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.