Literature DB >> 18332135

Calcium ions are involved in the unusual red shift of the light-harvesting 1 Qy transition of the core complex in thermophilic purple sulfur bacterium Thermochromatium tepidum.

Yukihiro Kimura1, Yu Hirano, Long-Jiang Yu, Hiroaki Suzuki, Masayuki Kobayashi, Zheng-Yu Wang.   

Abstract

Thermophilic purple sulfur bacterium, Thermochromatium tepidum, can grow at temperatures up to 58 degrees C and exhibits an unusual Qy absorption at 915 nm for the core light-harvesting complex (LH1), an approximately 35-nm red shift from those of its mesophilic counterparts. We demonstrate in this study, using a highly purified LH1-reaction center complex, that the LH1 Qy transition is strongly dependent on metal cations and Ca2+ is involved in the unusual red shift. Removal of the Ca2+ resulted in formation of a species with the LH1 Qy absorption at 880 nm, and addition of the Ca2+ to the 880-nm species recovered the native 915-nm form. Interchange between the two forms is fully reversible. Based on spectroscopic and isothermal titration calorimetry analyses, the Ca2+ binding to the LH1 complex was estimated to occur in a stoichiometric ratio of Ca2+/alphabeta-subunit = 1:1 and the binding constant was in 10(5) m(-1) order of magnitude, which is comparable with those for EF-hand Ca2+-binding proteins. Despite the high affinity, conformational changes in the LH1 complex upon Ca2+ binding were small and occurred slowly, with a typical time constant of approximately 6 min. Replacement of the Ca2+ with other metal cations caused blue shifts of the Qy bands depending on the property of the cations, indicating that the binding site is highly selective. Based on the amino acid sequences of the LH1 complex, possible Ca2+-binding sites are proposed that consist of several acidic amino acid residues near the membrane interfaces of the C-terminal region of the alpha-polypeptide and the N-terminal region of the beta-polypeptide.

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Year:  2008        PMID: 18332135     DOI: 10.1074/jbc.M800256200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  15 in total

1.  Ca(2+)-binding reduces conformational flexibility of RC-LH1 core complex from thermophile Thermochromatium tepidum.

Authors:  Selma Jakob-Grun; Jara Radeck; Paula Braun
Journal:  Photosynth Res       Date:  2012-02-25       Impact factor: 3.573

2.  Structure of the LH1-RC complex from Thermochromatium tepidum at 3.0 Å.

Authors:  Satomi Niwa; Long-Jiang Yu; Kazuki Takeda; Yu Hirano; Tomoaki Kawakami; Zheng-Yu Wang-Otomo; Kunio Miki
Journal:  Nature       Date:  2014-03-26       Impact factor: 49.962

3.  All-atom structures and calcium binding sites of the bacterial photosynthetic LH1-RC core complex from Thermochromatium tepidum.

Authors:  Maria G Khrenova; Alexander V Nemukhin; Bella L Grigorenko; Peng Wang; Jian-Ping Zhang
Journal:  J Mol Model       Date:  2014-05-23       Impact factor: 1.810

4.  C-terminal cleavage of the LH1 α-polypeptide in the Sr2+-cultured Thermochromatium tepidum.

Authors:  Yukihiro Kimura; Tomoaki Kawakami; Teruhisa Arikawa; Yong Li; Long-Jiang Yu; Takashi Ohno; Michael T Madigan; Zheng-Yu Wang-Otomo
Journal:  Photosynth Res       Date:  2017-05-10       Impact factor: 3.573

Review 5.  A comparative look at structural variation among RC-LH1 'Core' complexes present in anoxygenic phototrophic bacteria.

Authors:  Alastair T Gardiner; Tu C Nguyen-Phan; Richard J Cogdell
Journal:  Photosynth Res       Date:  2020-05-19       Impact factor: 3.573

6.  Probing structure-function relationships in early events in photosynthesis using a chimeric photocomplex.

Authors:  Kenji V P Nagashima; Mai Sasaki; Kanako Hashimoto; Shinichi Takaichi; Sakiko Nagashima; Long-Jiang Yu; Yuto Abe; Kenta Gotou; Tomoaki Kawakami; Mizuki Takenouchi; Yuuta Shibuya; Akira Yamaguchi; Takashi Ohno; Jian-Ren Shen; Kazuhito Inoue; Michael T Madigan; Yukihiro Kimura; Zheng-Yu Wang-Otomo
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-21       Impact factor: 11.205

7.  Examination of the putative Ca2+-binding site in the light-harvesting complex 1 of thermophilic purple sulfur bacterium Thermochromatium tepidum.

Authors:  Long-Jiang Yu; Shogo Kato; Zheng-Yu Wang
Journal:  Photosynth Res       Date:  2010-10-01       Impact factor: 3.573

8.  Gene sequencing and characterization of the light-harvesting complex 2 from thermophilic purple sulfur bacterium Thermochromatium tepidum.

Authors:  Fumie Sekine; Kentaro Horiguchi; Yasuhiro Kashino; Yuuki Shimizu; Long-Jiang Yu; Masayuki Kobayashi; Zheng-Yu Wang
Journal:  Photosynth Res       Date:  2011-05-19       Impact factor: 3.573

9.  The roles of C-terminal residues on the thermal stability and local heme environment of cytochrome c' from the thermophilic purple sulfur bacterium Thermochromatium tepidum.

Authors:  Yukihiro Kimura; Sachiko Kasuga; Masashi Unno; Takashi Furusawa; Shinsuke Osoegawa; Yuko Sasaki; Takashi Ohno; Zheng-Yu Wang-Otomo
Journal:  Photosynth Res       Date:  2014-12-18       Impact factor: 3.573

10.  Excitation dynamics of two spectral forms of the core complexes from photosynthetic bacterium Thermochromatium tepidum.

Authors:  Fei Ma; Yukihiro Kimura; Xiao-Hui Zhao; Yi-Shi Wu; Peng Wang; Li-Min Fu; Zheng-Yu Wang; Jian-Ping Zhang
Journal:  Biophys J       Date:  2008-05-23       Impact factor: 4.033

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