Literature DB >> 28935692

Probing structure-function relationships in early events in photosynthesis using a chimeric photocomplex.

Kenji V P Nagashima1, Mai Sasaki2, Kanako Hashimoto3, Shinichi Takaichi4, Sakiko Nagashima5,6, Long-Jiang Yu7, Yuto Abe2, Kenta Gotou2, Tomoaki Kawakami2, Mizuki Takenouchi2, Yuuta Shibuya2, Akira Yamaguchi2, Takashi Ohno3, Jian-Ren Shen7, Kazuhito Inoue8,6, Michael T Madigan9, Yukihiro Kimura10, Zheng-Yu Wang-Otomo11.   

Abstract

The native core light-harvesting complex (LH1) from the thermophilic purple phototrophic bacterium Thermochromatium tepidum requires Ca2+ for its thermal stability and characteristic absorption maximum at 915 nm. To explore the role of specific amino acid residues of the LH1 polypeptides in Ca-binding behavior, we constructed a genetic system for heterologously expressing the Tch. tepidum LH1 complex in an engineered Rhodobacter sphaeroides mutant strain. This system contained a chimeric pufBALM gene cluster (pufBA from Tch. tepidum and pufLM from Rba. sphaeroides) and was subsequently deployed for introducing site-directed mutations on the LH1 polypeptides. All mutant strains were capable of phototrophic (anoxic/light) growth. The heterologously expressed Tch. tepidum wild-type LH1 complex was isolated in a reaction center (RC)-associated form and displayed the characteristic absorption properties of this thermophilic phototroph. Spheroidene (the major carotenoid in Rba. sphaeroides) was incorporated into the Tch. tepidum LH1 complex in place of its native spirilloxanthins with one carotenoid molecule present per αβ-subunit. The hybrid LH1-RC complexes expressed in Rba. sphaeroides were characterized using absorption, fluorescence excitation, and resonance Raman spectroscopy. Site-specific mutagenesis combined with spectroscopic measurements revealed that α-D49, β-L46, and a deletion at position 43 of the α-polypeptide play critical roles in Ca binding in the Tch. tepidum LH1 complex; in contrast, α-N50 does not participate in Ca2+ coordination. These findings build on recent structural data obtained from a high-resolution crystallographic structure of the membrane integrated Tch. tepidum LH1-RC complex and have unambiguously identified the location of Ca2+ within this key antenna complex.

Entities:  

Keywords:  Ca binding; Qy transition; Thermochromatium tepidum; light harvesting; photosynthesis

Mesh:

Substances:

Year:  2017        PMID: 28935692      PMCID: PMC5642683          DOI: 10.1073/pnas.1703584114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Cross-species investigation of the functions of the Rhodobacter PufX polypeptide and the composition of the RC-LH1 core complex.

Authors:  Lucy I Crouch; Michael R Jones
Journal:  Biochim Biophys Acta       Date:  2011-11-03

2.  Purification, characterization and crystallization of the core complex from thermophilic purple sulfur bacterium Thermochromatium tepidum.

Authors:  Hiroaki Suzuki; Yu Hirano; Yukihiro Kimura; Shinichi Takaichi; Masayuki Kobayashi; Kunio Miki; Zheng-Yu Wang
Journal:  Biochim Biophys Acta       Date:  2007-06-16

3.  Calcium ions are involved in the unusual red shift of the light-harvesting 1 Qy transition of the core complex in thermophilic purple sulfur bacterium Thermochromatium tepidum.

Authors:  Yukihiro Kimura; Yu Hirano; Long-Jiang Yu; Hiroaki Suzuki; Masayuki Kobayashi; Zheng-Yu Wang
Journal:  J Biol Chem       Date:  2008-03-10       Impact factor: 5.157

4.  Structural Basis for the Unusual Qy Red-Shift and Enhanced Thermostability of the LH1 Complex from Thermochromatium tepidum.

Authors:  Long-Jiang Yu; Tomoaki Kawakami; Yukihiro Kimura; Zheng-Yu Wang-Otomo
Journal:  Biochemistry       Date:  2016-11-16       Impact factor: 3.162

5.  Effects of Calcium Ions on the Thermostability and Spectroscopic Properties of the LH1-RC Complex from a New Thermophilic Purple Bacterium Allochromatium tepidum.

Authors:  Yukihiro Kimura; Shuwen Lyu; Akira Okoshi; Koudai Okazaki; Natsuki Nakamura; Akira Ohashi; Takashi Ohno; Manami Kobayashi; Michie Imanishi; Shinichi Takaichi; Michael T Madigan; Zheng-Yu Wang-Otomo
Journal:  J Phys Chem B       Date:  2017-05-04       Impact factor: 2.991

6.  Exchange and complementation of genes coding for photosynthetic reaction center core subunits among purple bacteria.

Authors:  Kenji V P Nagashima; André Verméglio; Naoki Fusada; Sakiko Nagashima; Keizo Shimada; Kazuhito Inoue
Journal:  J Mol Evol       Date:  2014-07-31       Impact factor: 2.395

7.  Purification and characterization of the polypeptides of core light-harvesting complexes from purple sulfur bacteria.

Authors:  Zheng-Yu Wang; Masahiro Shimonaga; Hiroaki Suzuki; Masayuki Kobayashi; Tsunenori Nozawa
Journal:  Photosynth Res       Date:  2003       Impact factor: 3.573

8.  Metal cations modulate the bacteriochlorophyll-protein interaction in the light-harvesting 1 core complex from Thermochromatium tepidum.

Authors:  Yukihiro Kimura; Yuta Inada; Tomoko Numata; Teruhisa Arikawa; Yong Li; Jian-Ping Zhang; Zheng-Yu Wang; Takashi Ohno
Journal:  Biochim Biophys Acta       Date:  2012-03-21

9.  Structure of the puf operon of the obligately aerobic, bacteriochlorophyll alpha-containing bacterium Roseobacter denitrificans OCh114 and its expression in a Rhodobacter capsulatus puf puc deletion mutant.

Authors:  C Kortlüke; K Breese; N Gad'on; A Labahn; G Drews
Journal:  J Bacteriol       Date:  1997-09       Impact factor: 3.490

10.  Probing the effect of the binding site on the electrostatic behavior of a series of carotenoids reconstituted into the light-harvesting 1 complex from purple photosynthetic bacterium Rhodospirillum rubrum detected by stark spectroscopy.

Authors:  Katsunori Nakagawa; Satoru Suzuki; Ritsuko Fujii; Alastair T Gardiner; Richard J Cogdell; Mamoru Nango; Hideki Hashimoto
Journal:  J Phys Chem B       Date:  2008-07-10       Impact factor: 2.991

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  6 in total

1.  Circular dichroism and resonance Raman spectroscopies of bacteriochlorophyll b-containing LH1-RC complexes.

Authors:  Y Kimura; T Yamashita; R Seto; M Imanishi; M Honda; S Nakagawa; Y Saga; S Takenaka; L-J Yu; M T Madigan; Z-Y Wang-Otomo
Journal:  Photosynth Res       Date:  2021-04-08       Impact factor: 3.573

2.  Changing Form and Function through Carotenoids and Synthetic Biology.

Authors:  Eleanore T Wurtzel
Journal:  Plant Physiol       Date:  2018-10-25       Impact factor: 8.340

3.  Complete genome of the thermophilic purple sulfur Bacterium Thermochromatium tepidum compared to Allochromatium vinosum and other Chromatiaceae.

Authors:  W Matthew Sattley; Wesley D Swingley; Brad M Burchell; Emma D Dewey; Mackenzie K Hayward; Tara L Renbarger; Kathryn N Shaffer; Lynn M Stokes; Sonja A Gurbani; Catrina M Kujawa; D Adam Nuccio; Jacob Schladweiler; Jeffrey W Touchman; Zheng-Yu Wang-Otomo; Robert E Blankenship; Michael T Madigan
Journal:  Photosynth Res       Date:  2021-10-20       Impact factor: 3.573

4.  Engineering of B800 bacteriochlorophyll binding site specificity in the Rhodobacter sphaeroides LH2 antenna.

Authors:  David J K Swainsbury; Kaitlyn M Faries; Dariusz M Niedzwiedzki; Elizabeth C Martin; Adam J Flinders; Daniel P Canniffe; Gaozhong Shen; Donald A Bryant; Christine Kirmaier; Dewey Holten; C Neil Hunter
Journal:  Biochim Biophys Acta Bioenerg       Date:  2018-11-09       Impact factor: 4.428

5.  A Ca2+-binding motif underlies the unusual properties of certain photosynthetic bacterial core light-harvesting complexes.

Authors:  Kazutoshi Tani; Kazumi Kobayashi; Naoki Hosogi; Xuan-Cheng Ji; Sakiko Nagashima; Kenji V P Nagashima; Airi Izumida; Kazuhito Inoue; Yusuke Tsukatani; Ryo Kanno; Malgorzata Hall; Long-Jiang Yu; Isamu Ishikawa; Yoshihiro Okura; Michael T Madigan; Akira Mizoguchi; Bruno M Humbel; Yukihiro Kimura; Zheng-Yu Wang-Otomo
Journal:  J Biol Chem       Date:  2022-04-20       Impact factor: 5.486

6.  A previously unrecognized membrane protein in the Rhodobacter sphaeroides LH1-RC photocomplex.

Authors:  Kazutoshi Tani; Kenji V P Nagashima; Ryo Kanno; Saki Kawamura; Riku Kikuchi; Malgorzata Hall; Long-Jiang Yu; Yukihiro Kimura; Michael T Madigan; Akira Mizoguchi; Bruno M Humbel; Zheng-Yu Wang-Otomo
Journal:  Nat Commun       Date:  2021-11-02       Impact factor: 14.919

  6 in total

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