Literature DB >> 21594712

Gene sequencing and characterization of the light-harvesting complex 2 from thermophilic purple sulfur bacterium Thermochromatium tepidum.

Fumie Sekine1, Kentaro Horiguchi, Yasuhiro Kashino, Yuuki Shimizu, Long-Jiang Yu, Masayuki Kobayashi, Zheng-Yu Wang.   

Abstract

In this study, gene sequences coding for the light-harvesting (LH) 2 polypeptides from a thermophilic purple sulfur bacterium Thermochromatium tepidum are reported and characterization of the LH2 complex is described. Three sets of pucBA genes have been identified, and the gene products have been analyzed by electrophoresis and reversed-phase chromatography. The result shows that all of the genes are expressed but the distribution of the expression is not uniform. The gene products undergo post-translational modification, where two of the β-polypeptides appear to be N-terminally methylated. Absorption spectrum of the purified LH2 complex exhibits Q (y) transitions at 800 and 854 nm in dodecyl β-maltopyranoside solution, and the circular dichroism spectrum shows a "molischianum"-like characteristic. No spectral change was observed for the LH2 when the bacterium was cultured under different conditions of light intensity. In lauryl dimethylamine N-oxide (LDAO) solution, significant changes in the absorption spectrum were observed. The B850 peak decreased and blue-shifted with increasing the LDAO concentration, whereas the B800 intensity increased without change in the peak position. The spectral changes can be partially or almost completely reversed by addition of metal ions, and the divalent cations seem to be more effective. The results indicate that ionic interactions may exist between LH2, detergent molecules and metal ions. Possible mechanisms involved in the detergent- and cation-induced spectral changes are discussed.

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Year:  2011        PMID: 21594712     DOI: 10.1007/s11120-011-9658-9

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  34 in total

1.  The 7.5-A electron density and spectroscopic properties of a novel low-light B800 LH2 from Rhodopseudomonas palustris.

Authors:  Nichola Hartigan; Hazel A Tharia; Frank Sweeney; Anna M Lawless; Miroslav Z Papiz
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

2.  Absorption and CD spectroscopy and modeling of various LH2 complexes from purple bacteria.

Authors:  Sofia Georgakopoulou; Raoul N Frese; Evelyn Johnson; Corline Koolhaas; Richard J Cogdell; Rienk van Grondelle; Gert van der Zwan
Journal:  Biophys J       Date:  2002-04       Impact factor: 4.033

3.  Variable LH2 stoichiometry and core clustering in native membranes of Rhodospirillum photometricum.

Authors:  Simon Scheuring; Jean-Louis Rigaud; James N Sturgis
Journal:  EMBO J       Date:  2004-09-30       Impact factor: 11.598

4.  Purification, characterization and crystallization of the core complex from thermophilic purple sulfur bacterium Thermochromatium tepidum.

Authors:  Hiroaki Suzuki; Yu Hirano; Yukihiro Kimura; Shinichi Takaichi; Masayuki Kobayashi; Kunio Miki; Zheng-Yu Wang
Journal:  Biochim Biophys Acta       Date:  2007-06-16

5.  Calcium ions are involved in the unusual red shift of the light-harvesting 1 Qy transition of the core complex in thermophilic purple sulfur bacterium Thermochromatium tepidum.

Authors:  Yukihiro Kimura; Yu Hirano; Long-Jiang Yu; Hiroaki Suzuki; Masayuki Kobayashi; Zheng-Yu Wang
Journal:  J Biol Chem       Date:  2008-03-10       Impact factor: 5.157

6.  The peripheral light-harvesting complexes from purple sulfur bacteria have different 'ring' sizes.

Authors:  Sami Kereïche; Laurent Bourinet; Wilko Keegstra; Ana A Arteni; Jean-Marc Verbavatz; Egbert J Boekema; Bruno Robert; Andrew Gall
Journal:  FEBS Lett       Date:  2008-10-07       Impact factor: 4.124

7.  Single-molecule spectroscopy reveals that individual low-light LH2 complexes from Rhodopseudomonas palustris 2.1.6. have a heterogeneous polypeptide composition.

Authors:  Tatas H P Brotosudarmo; Ralf Kunz; Paul Böhm; Alastair T Gardiner; Vladimíra Moulisová; Richard J Cogdell; Jürgen Köhler
Journal:  Biophys J       Date:  2009-09-02       Impact factor: 4.033

8.  Photochemical reactions of purple bacteria as revealed by studies of three spectrally different carotenobacteriochlorophyll-protein complexes isolated from Chromatium, strain D.

Authors:  J P Thornber
Journal:  Biochemistry       Date:  1970-06-23       Impact factor: 3.162

9.  Purification and characterization of the polypeptides of core light-harvesting complexes from purple sulfur bacteria.

Authors:  Zheng-Yu Wang; Masahiro Shimonaga; Hiroaki Suzuki; Masayuki Kobayashi; Tsunenori Nozawa
Journal:  Photosynth Res       Date:  2003       Impact factor: 3.573

10.  The crystal structure of the light-harvesting complex II (B800-850) from Rhodospirillum molischianum.

Authors:  J Koepke; X Hu; C Muenke; K Schulten; H Michel
Journal:  Structure       Date:  1996-05-15       Impact factor: 5.006

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  8 in total

1.  C-terminal cleavage of the LH1 α-polypeptide in the Sr2+-cultured Thermochromatium tepidum.

Authors:  Yukihiro Kimura; Tomoaki Kawakami; Teruhisa Arikawa; Yong Li; Long-Jiang Yu; Takashi Ohno; Michael T Madigan; Zheng-Yu Wang-Otomo
Journal:  Photosynth Res       Date:  2017-05-10       Impact factor: 3.573

2.  Effects of low-molecular-weight polyols on the hydration status of the light-harvesting complex 2 from Rhodobacter sphaeroides 2.4.1.

Authors:  Ying Shi; Jie Yu; Yu-Chen Liu; Peng Wang; Jian-Ping Zhang
Journal:  Photochem Photobiol Sci       Date:  2021-04-28       Impact factor: 3.982

3.  The roles of C-terminal residues on the thermal stability and local heme environment of cytochrome c' from the thermophilic purple sulfur bacterium Thermochromatium tepidum.

Authors:  Yukihiro Kimura; Sachiko Kasuga; Masashi Unno; Takashi Furusawa; Shinsuke Osoegawa; Yuko Sasaki; Takashi Ohno; Zheng-Yu Wang-Otomo
Journal:  Photosynth Res       Date:  2014-12-18       Impact factor: 3.573

4.  Complete genome of the thermophilic purple sulfur Bacterium Thermochromatium tepidum compared to Allochromatium vinosum and other Chromatiaceae.

Authors:  W Matthew Sattley; Wesley D Swingley; Brad M Burchell; Emma D Dewey; Mackenzie K Hayward; Tara L Renbarger; Kathryn N Shaffer; Lynn M Stokes; Sonja A Gurbani; Catrina M Kujawa; D Adam Nuccio; Jacob Schladweiler; Jeffrey W Touchman; Zheng-Yu Wang-Otomo; Robert E Blankenship; Michael T Madigan
Journal:  Photosynth Res       Date:  2021-10-20       Impact factor: 3.573

5.  Catalytic promiscuity of a bacterial α-N-methyltransferase.

Authors:  Qi Zhang; Wilfred A van der Donk
Journal:  FEBS Lett       Date:  2012-07-25       Impact factor: 4.124

6.  A Ca2+-binding motif underlies the unusual properties of certain photosynthetic bacterial core light-harvesting complexes.

Authors:  Kazutoshi Tani; Kazumi Kobayashi; Naoki Hosogi; Xuan-Cheng Ji; Sakiko Nagashima; Kenji V P Nagashima; Airi Izumida; Kazuhito Inoue; Yusuke Tsukatani; Ryo Kanno; Malgorzata Hall; Long-Jiang Yu; Isamu Ishikawa; Yoshihiro Okura; Michael T Madigan; Akira Mizoguchi; Bruno M Humbel; Yukihiro Kimura; Zheng-Yu Wang-Otomo
Journal:  J Biol Chem       Date:  2022-04-20       Impact factor: 5.486

7.  Effects of Detergents on the Spectral Features of B820 Bacteriochlorophyll a in Light-Harvesting Complex 3.

Authors:  Yoshitaka Saga; Kohei Hamanishi
Journal:  ACS Omega       Date:  2022-08-11

8.  A previously unrecognized membrane protein in the Rhodobacter sphaeroides LH1-RC photocomplex.

Authors:  Kazutoshi Tani; Kenji V P Nagashima; Ryo Kanno; Saki Kawamura; Riku Kikuchi; Malgorzata Hall; Long-Jiang Yu; Yukihiro Kimura; Michael T Madigan; Akira Mizoguchi; Bruno M Humbel; Zheng-Yu Wang-Otomo
Journal:  Nat Commun       Date:  2021-11-02       Impact factor: 14.919

  8 in total

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