Literature DB >> 18326717

Bayesian machine learning classifiers for combining structural and functional measurements to classify healthy and glaucomatous eyes.

Christopher Bowd1, Jiucang Hao, Ivan M Tavares, Felipe A Medeiros, Linda M Zangwill, Te-Won Lee, Pamela A Sample, Robert N Weinreb, Michael H Goldbaum.   

Abstract

PURPOSE: To determine whether combining structural (optical coherence tomography, OCT) and functional (standard automated perimetry, SAP) measurements as input for machine learning classifiers (MLCs; relevance vector machine, RVM; and subspace mixture of Gaussians, SSMoG) improves diagnostic accuracy for detecting glaucomatous eyes compared with using each measurement method alone.
METHODS: Sixty-nine eyes of 69 healthy control subjects (average age, 62.0, SD 9.7 years; visual field mean deviation [MD], -0.70, SD 1.41 dB) and 156 eyes of 156 patients with glaucoma (average age, 66.4, SD 10.2 years; visual field MD, -3.12, SD 3.43 dB) were imaged with OCT (Stratus OCT, Carl Zeiss Meditec, Inc., Dublin, CA) and tested with SAP (Humphrey Field Analyzer II with Swedish Interactive Thresholding Algorithm, SITA; Carl Zeiss Meditec, Inc.) within 3 months of each other. RVM and SSMoG MLCs were trained and tested on OCT-determined RNFL thickness measurements from 32 sectors ( approximately 11.25 degrees each) obtained in the circumpapillary area under the instrument-defined measurement ellipse and SAP pattern deviation values from 52 points from the 24-2 grid, independently and in combination. Tenfold cross-validation was used to train and test classifiers on unique subsets of the full 225-eye data set, and areas under the receiver operating characteristic curve (AUROC) for the classification of eyes in the test set were generated. AUROC results from classifiers trained on OCT and SAP alone and those trained on OCT and SAP in combination were compared. In addition, these results were compared to currently available OCT measurements (mean retinal nerve fiber layer [RNFL] thickness, inferior RNFL thickness, and superior RNFL thickness) and SAP indices (MD and pattern standard deviation [PSD]).
RESULTS: The AUROCs for RVM trained on OCT parameters alone, SAP parameters alone and OCT and SAP parameters combined were 0.809, 0.815, and 0.845, respectively. The AUROCs for SSMoG trained on OCT parameters alone, SAP parameters alone, and OCT and SAP parameters combined were 0.817, 0.841, and 0.869, respectively. Combining techniques using both RVM and SSMoG significantly improved on MLC analysis of OCT, but not SAP, measurements alone. Classification performance using RVM and SSMoG was statistically similar.
CONCLUSIONS: RVM and SSMoG Bayesian MLCs trained on OCT and SAP data can successfully discriminate between healthy and early glaucomatous eyes. Combining OCT and SAP measurements using RVM and SSMoG increased diagnostic performance marginally compared with MLC analysis of data obtained using each technology alone.

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Year:  2008        PMID: 18326717     DOI: 10.1167/iovs.07-1083

Source DB:  PubMed          Journal:  Invest Ophthalmol Vis Sci        ISSN: 0146-0404            Impact factor:   4.799


  29 in total

1.  Population-based evaluation of retinal nerve fiber layer, retinal ganglion cell layer, and inner plexiform layer as a diagnostic tool for glaucoma.

Authors:  Henriët Springelkamp; Kyungmoo Lee; Roger C W Wolfs; Gabriëlle H S Buitendijk; Wishal D Ramdas; Albert Hofman; Johannes R Vingerling; Caroline C W Klaver; Michael D Abràmoff; Nomdo M Jansonius
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-11-20       Impact factor: 4.799

2.  Predicting glaucomatous progression in glaucoma suspect eyes using relevance vector machine classifiers for combined structural and functional measurements.

Authors:  Christopher Bowd; Intae Lee; Michael H Goldbaum; Madhusudhanan Balasubramanian; Felipe A Medeiros; Linda M Zangwill; Christopher A Girkin; Jeffrey M Liebmann; Robert N Weinreb
Journal:  Invest Ophthalmol Vis Sci       Date:  2012-04-30       Impact factor: 4.799

3.  Development and validation of an improved neurological hemifield test to identify chiasmal and postchiasmal lesions by automated perimetry.

Authors:  Allison N McCoy; Harry A Quigley; Jiangxia Wang; Neil R Miller; Prem S Subramanian; Pradeep Y Ramulu; Michael V Boland
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-02-20       Impact factor: 4.799

4.  Improving glaucoma detection using spatially correspondent clusters of damage and by combining standard automated perimetry and optical coherence tomography.

Authors:  Ali S Raza; Xian Zhang; Carlos G V De Moraes; Charles A Reisman; Jeffrey M Liebmann; Robert Ritch; Donald C Hood
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-01-29       Impact factor: 4.799

5.  Combining information from 3 anatomic regions in the diagnosis of glaucoma with time-domain optical coherence tomography.

Authors:  Mingwu Wang; Ake Tzu-Hui Lu; Rohit Varma; Joel S Schuman; David S Greenfield; David Huang
Journal:  J Glaucoma       Date:  2014-03       Impact factor: 2.503

6.  Hybrid Deep Learning on Single Wide-field Optical Coherence tomography Scans Accurately Classifies Glaucoma Suspects.

Authors:  Hassan Muhammad; Thomas J Fuchs; Nicole De Cuir; Carlos G De Moraes; Dana M Blumberg; Jeffrey M Liebmann; Robert Ritch; Donald C Hood
Journal:  J Glaucoma       Date:  2017-12       Impact factor: 2.503

7.  Diagnostic ability of Humphrey perimetry, Octopus perimetry, and optical coherence tomography for glaucomatous optic neuropathy.

Authors:  B Monsalve; A Ferreras; P Calvo; J A Urcola; M Figus; J Monsalve; P Frezzotti
Journal:  Eye (Lond)       Date:  2016-11-11       Impact factor: 3.775

8.  Combining Frequency Doubling Technology Perimetry and Scanning Laser Polarimetry for Glaucoma Detection.

Authors:  Jean-Claude Mwanza; Joshua L Warren; Jessica T Hochberg; Donald L Budenz; Robert T Chang; Pradeep Y Ramulu
Journal:  J Glaucoma       Date:  2015 Oct-Nov       Impact factor: 2.503

9.  Automatic segmentation of up to ten layer boundaries in SD-OCT images of the mouse retina with and without missing layers due to pathology.

Authors:  Pratul P Srinivasan; Stephanie J Heflin; Joseph A Izatt; Vadim Y Arshavsky; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2014-01-07       Impact factor: 3.732

10.  Combining functional and structural tests improves the diagnostic accuracy of relevance vector machine classifiers.

Authors:  Lyne Racette; Christine Y Chiou; Jiucang Hao; Christopher Bowd; Michael H Goldbaum; Linda M Zangwill; Te-Won Lee; Robert N Weinreb; Pamela A Sample
Journal:  J Glaucoma       Date:  2010-03       Impact factor: 2.503

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