Literature DB >> 18310411

Development of bottom-fermenting saccharomyces strains that produce high SO2 levels, using integrated metabolome and transcriptome analysis.

Satoshi Yoshida1, Jun Imoto, Toshiko Minato, Rie Oouchi, Mao Sugihara, Takeo Imai, Tatsuji Ishiguro, Satoru Mizutani, Masaru Tomita, Tomoyoshi Soga, Hiroyuki Yoshimoto.   

Abstract

Sulfite plays an important role in beer flavor stability. Although breeding of bottom-fermenting Saccharomyces strains that produce high levels of SO(2) is desirable, it is complicated by the fact that undesirable H(2)S is produced as an intermediate in the same pathway. Here, we report the development of a high-level SO(2)-producing bottom-fermenting yeast strain by integrated metabolome and transcriptome analysis. This analysis revealed that O-acetylhomoserine (OAH) is the rate-limiting factor for the production of SO(2) and H(2)S. Appropriate genetic modifications were then introduced into a prototype strain to increase metabolic fluxes from aspartate to OAH and from sulfate to SO(2), resulting in high SO(2) and low H(2)S production. Spontaneous mutants of an industrial strain that were resistant to both methionine and threonine analogs were then analyzed for similar metabolic fluxes. One promising mutant produced much higher levels of SO(2) than the parent but produced parental levels of H(2)S.

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Year:  2008        PMID: 18310411      PMCID: PMC2394901          DOI: 10.1128/AEM.01781-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  25 in total

1.  Amino acid analysis by capillary electrophoresis electrospray ionization mass spectrometry.

Authors:  T Soga; D N Heiger
Journal:  Anal Chem       Date:  2000-03-15       Impact factor: 6.986

2.  Simultaneous determination of anionic intermediates for Bacillus subtilis metabolic pathways by capillary electrophoresis electrospray ionization mass spectrometry.

Authors:  Tomoyoshi Soga; Yuki Ueno; Hisako Naraoka; Yoshiaki Ohashi; Masaru Tomita; Takaaki Nishioka
Journal:  Anal Chem       Date:  2002-05-15       Impact factor: 6.986

Review 3.  NMR-based metabolomics.

Authors:  Nicholas V Reo
Journal:  Drug Chem Toxicol       Date:  2002-11       Impact factor: 3.356

4.  Isolation and characterization of a gene specific to lager brewing yeast that encodes a branched-chain amino acid permease.

Authors:  Y Kodama; F Omura; T Ashikari
Journal:  Appl Environ Microbiol       Date:  2001-08       Impact factor: 4.792

5.  Nontargeted metabolome analysis by use of Fourier Transform Ion Cyclotron Mass Spectrometry.

Authors:  Asaph Aharoni; C H Ric de Vos; Harrie A Verhoeven; Chris A Maliepaard; Gary Kruppa; Raoul Bino; Dayan B Goodenowe
Journal:  OMICS       Date:  2002

6.  Metabolite profiling for plant functional genomics.

Authors:  O Fiehn; J Kopka; P Dörmann; T Altmann; R N Trethewey; L Willmitzer
Journal:  Nat Biotechnol       Date:  2000-11       Impact factor: 54.908

7.  Increasing sulphite formation in Saccharomyces cerevisiae by overexpression of MET14 and SSU1.

Authors:  Ute E B Donalies; Ulf Stahl
Journal:  Yeast       Date:  2002-04       Impact factor: 3.239

8.  Diversity of the HO gene encoding an endonuclease for mating-type conversion in the bottom fermenting yeast Saccharomyces pastorianus.

Authors:  Y Tamai; K Tanaka; N Umemoto; K Tomizuka; Y Kaneko
Journal:  Yeast       Date:  2000-10       Impact factor: 3.239

9.  A comprehensive two-hybrid analysis to explore the yeast protein interactome.

Authors:  T Ito; T Chiba; R Ozawa; M Yoshida; M Hattori; Y Sakaki
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

10.  Identification and characterization of amidase- homologous AMI1 genes of bottom-fermenting yeast.

Authors:  Satoshi Yoshida; Kaori Hashimoto; Keiko Tanaka-Kanai; Hiroyuki Yoshimoto; Osamu Kobayashi
Journal:  Yeast       Date:  2007-12       Impact factor: 3.239

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  8 in total

1.  Secretion expression of SOD1 and its overlapping function with GSH in brewing yeast strain for better flavor and anti-aging ability.

Authors:  Zhaoyue Wang; Xuejing Bai; Xiuping He; Borun Zhang
Journal:  J Ind Microbiol Biotechnol       Date:  2014-07-19       Impact factor: 3.346

2.  Sterol side chain reductase 2 is a key enzyme in the biosynthesis of cholesterol, the common precursor of toxic steroidal glycoalkaloids in potato.

Authors:  Satoru Sawai; Kiyoshi Ohyama; Shuhei Yasumoto; Hikaru Seki; Tetsushi Sakuma; Takashi Yamamoto; Yumiko Takebayashi; Mikiko Kojima; Hitoshi Sakakibara; Toshio Aoki; Toshiya Muranaka; Kazuki Saito; Naoyuki Umemoto
Journal:  Plant Cell       Date:  2014-09-12       Impact factor: 11.277

Review 3.  Improving industrial yeast strains: exploiting natural and artificial diversity.

Authors:  Jan Steensels; Tim Snoek; Esther Meersman; Martina Picca Nicolino; Karin Voordeckers; Kevin J Verstrepen
Journal:  FEMS Microbiol Rev       Date:  2014-05-08       Impact factor: 16.408

4.  Dynamic metabolic profiling of cyanobacterial glycogen biosynthesis under conditions of nitrate depletion.

Authors:  Tomohisa Hasunuma; Fumi Kikuyama; Mami Matsuda; Shimpei Aikawa; Yoshihiro Izumi; Akihiko Kondo
Journal:  J Exp Bot       Date:  2013-05-08       Impact factor: 6.992

5.  Metabolic pathway engineering based on metabolomics confers acetic and formic acid tolerance to a recombinant xylose-fermenting strain of Saccharomyces cerevisiae.

Authors:  Tomohisa Hasunuma; Tomoya Sanda; Ryosuke Yamada; Kazuya Yoshimura; Jun Ishii; Akihiko Kondo
Journal:  Microb Cell Fact       Date:  2011-01-10       Impact factor: 5.328

6.  Systematic applications of metabolomics in metabolic engineering.

Authors:  Robert A Dromms; Mark P Styczynski
Journal:  Metabolites       Date:  2012-12-14

7.  Identification of new Saccharomyces cerevisiae variants of the MET2 and SKP2 genes controlling the sulfur assimilation pathway and the production of undesirable sulfur compounds during alcoholic fermentation.

Authors:  Jessica Noble; Isabelle Sanchez; Bruno Blondin
Journal:  Microb Cell Fact       Date:  2015-05-08       Impact factor: 5.328

Review 8.  Lager-brewing yeasts in the era of modern genetics.

Authors:  Arthur R Gorter de Vries; Jack T Pronk; Jean-Marc G Daran
Journal:  FEMS Yeast Res       Date:  2019-11-01       Impact factor: 2.796

  8 in total

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