Literature DB >> 18289879

Reconstruction of central cortical surface from brain MRI images: method and application.

Tianming Liu1, Jingxin Nie, Ashley Tarokh, Lei Guo, Stephen T C Wong.   

Abstract

Reconstruction of the central surface representation of the cerebral cortex is an important means to study the structure and function of the human brain. In this paper, we propose a novel method based on an elastic transform vector field to drive a deformable model for the reconstruction of the central cortical surface. Both simulated brain cortexes and real brain images are used to evaluate this approach. We applied the surface reconstruction method and a hybrid volumetric and surface registration algorithm to detect simulated brain atrophy. Experimental results show that the central cortical surface representation has better performance in detecting simulated atrophy than the traditionally used inner or outer cortical surface representations.

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Year:  2007        PMID: 18289879      PMCID: PMC2505350          DOI: 10.1016/j.neuroimage.2007.12.027

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  33 in total

1.  Automated 3-D extraction of inner and outer surfaces of cerebral cortex from MRI.

Authors:  D MacDonald; N Kabani; D Avis; A C Evans
Journal:  Neuroimage       Date:  2000-09       Impact factor: 6.556

2.  Automated graph-based analysis and correction of cortical volume topology.

Authors:  D W Shattuck; R M Leahy
Journal:  IEEE Trans Med Imaging       Date:  2001-11       Impact factor: 10.048

3.  Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.

Authors:  Bruce Fischl; David H Salat; Evelina Busa; Marilyn Albert; Megan Dieterich; Christian Haselgrove; Andre van der Kouwe; Ron Killiany; David Kennedy; Shuna Klaveness; Albert Montillo; Nikos Makris; Bruce Rosen; Anders M Dale
Journal:  Neuron       Date:  2002-01-31       Impact factor: 17.173

4.  A proof of the spherical homeomorphism conjecture for surfaces.

Authors:  Lowell Abrams; Donniell E Fishkind; Carey E Priebe
Journal:  IEEE Trans Med Imaging       Date:  2002-12       Impact factor: 10.048

5.  Deformable registration of cortical structures via hybrid volumetric and surface warping.

Authors:  Tianming Liu; Dinggang Shen; Christos Davatzikos
Journal:  Neuroimage       Date:  2004-08       Impact factor: 6.556

6.  76-space analysis of grey matter diffusivity: methods and applications.

Authors:  Tianming Liu; Geoffrey Young; Ling Huang; Nan-Kuei Chen; Stephen T C Wong
Journal:  Neuroimage       Date:  2006-01-23       Impact factor: 6.556

7.  Snakes, shapes, and gradient vector flow.

Authors:  C Xu; J L Prince
Journal:  IEEE Trans Image Process       Date:  1998       Impact factor: 10.856

8.  Image registration based on boundary mapping.

Authors:  C Davatzikos; J L Prince; R N Bryan
Journal:  IEEE Trans Med Imaging       Date:  1996       Impact factor: 10.048

9.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

10.  Simulation of tissue atrophy using a topology preserving transformation model.

Authors:  Bilge Karaçali; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2006-05       Impact factor: 10.048

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  40 in total

1.  Mechanisms of circumferential gyral convolution in primate brains.

Authors:  Tuo Zhang; Mir Jalil Razavi; Hanbo Chen; Yujie Li; Xiao Li; Longchuan Li; Lei Guo; Xiaoping Hu; Tianming Liu; Xianqiao Wang
Journal:  J Comput Neurosci       Date:  2017-03-07       Impact factor: 1.621

2.  Group-wise consistent cortical parcellation based on connectional profiles.

Authors:  Tuo Zhang; Dajiang Zhu; Xi Jiang; Shu Zhang; Zhifeng Kou; Lei Guo; Tianming Liu
Journal:  Med Image Anal       Date:  2016-03-14       Impact factor: 8.545

3.  Automated segmentation of mouse brain images using multi-atlas multi-ROI deformation and label fusion.

Authors:  Jingxin Nie; Dinggang Shen
Journal:  Neuroinformatics       Date:  2013-01

4.  An automated pipeline for cortical sulcal fundi extraction.

Authors:  Gang Li; Lei Guo; Jingxin Nie; Tianming Liu
Journal:  Med Image Anal       Date:  2010-02-04       Impact factor: 8.545

5.  Consistent reconstruction of cortical surfaces from longitudinal brain MR images.

Authors:  Gang Li; Jingxin Nie; Guorong Wu; Yaping Wang; Dinggang Shen
Journal:  Neuroimage       Date:  2011-11-15       Impact factor: 6.556

6.  Deep Learning Models Unveiled Functional Difference Between Cortical Gyri and Sulci.

Authors:  Shu Zhang; Huan Liu; Heng Huang; Yu Zhao; Xi Jiang; Brook Bowers; Lei Guo; Xiaoping Hu; Mar Sanchez; Tianming Liu
Journal:  IEEE Trans Biomed Eng       Date:  2018-09-28       Impact factor: 4.538

7.  Resting state fMRI-guided fiber clustering: methods and applications.

Authors:  Bao Ge; Lei Guo; Tuo Zhang; Xintao Hu; Junwei Han; Tianming Liu
Journal:  Neuroinformatics       Date:  2013-01

8.  Development of cortical anatomical properties from early childhood to early adulthood.

Authors:  Jingxin Nie; Gang Li; Dinggang Shen
Journal:  Neuroimage       Date:  2013-03-21       Impact factor: 6.556

9.  Predictive models of resting state networks for assessment of altered functional connectivity in mild cognitive impairment.

Authors:  Xi Jiang; Dajiang Zhu; Kaiming Li; Tuo Zhang; Lihong Wang; Dinggang Shen; Lei Guo; Tianming Liu
Journal:  Brain Imaging Behav       Date:  2014-12       Impact factor: 3.978

10.  A functional model of cortical gyri and sulci.

Authors:  Fan Deng; Xi Jiang; Dajiang Zhu; Tuo Zhang; Kaiming Li; Lei Guo; Tianming Liu
Journal:  Brain Struct Funct       Date:  2013-05-21       Impact factor: 3.270

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