Literature DB >> 30281424

Deep Learning Models Unveiled Functional Difference Between Cortical Gyri and Sulci.

Shu Zhang, Huan Liu, Heng Huang, Yu Zhao, Xi Jiang, Brook Bowers, Lei Guo, Xiaoping Hu, Mar Sanchez, Tianming Liu.   

Abstract

It is largely unknown whether there is functional role difference between cortical gyral and sulcal regions. Recent advancements in neuroimaging studies demonstrate clear difference of structural connection profiles in gyral and sulcal areas, suggesting possible functional role difference in these convex and concave cortical regions. To explore and confirm such possible functional difference, we design and apply a powerful deep learning model of convolutional neural networks (CNN) that has been proven to be superior in learning discriminative and meaningful patterns on fMRI. By using the CNN model, gyral and sulcal fMRI signals are learned and predicted, and the prediction performance is adopted to demonstrate the functional difference between gyri and sulci. By using the Human Connectome Project (HCP) fMRI data and macaque brain fMRI data, an average of 83% and 90% classification accuracy has been achieved to separate gyral/sulcal HCP task fMRI signals at the population and individual subject level, respectively; 81% and 86% classification accuracy for resting state fMRI signals at the group and individual subject level, respectively. In addition, 78% classification accuracy has been achieved to separate gyral/sulcal resting state fMRI signals in macaque brains. Importantly, further analysis reveals that the discriminative features that are learned by CNNs to differentiate gyral/sulcal fMRI signals can be meaningfully interpreted, thus unveiling the fundamental functional difference between cortical gyri and sulci. That is, gyri are more global functional integration centers with simpler lower frequency signal components, while sulci are more local processing units with more complex higher frequency signal components.

Entities:  

Mesh:

Year:  2018        PMID: 30281424      PMCID: PMC6500590          DOI: 10.1109/TBME.2018.2872726

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  41 in total

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2.  An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.

Authors:  Rahul S Desikan; Florent Ségonne; Bruce Fischl; Brian T Quinn; Bradford C Dickerson; Deborah Blacker; Randy L Buckner; Anders M Dale; R Paul Maguire; Bradley T Hyman; Marilyn S Albert; Ronald J Killiany
Journal:  Neuroimage       Date:  2006-03-10       Impact factor: 6.556

3.  Gyral development of the human brain.

Authors:  J G Chi; E C Dooling; F H Gilles
Journal:  Ann Neurol       Date:  1977-01       Impact factor: 10.422

4.  Denser Growing Fiber Connections Induce 3-hinge Gyral Folding.

Authors:  Fangfei Ge; Xiao Li; Mir Jalil Razavi; Hanbo Chen; Tuo Zhang; Shu Zhang; Lei Guo; Xiaoping Hu; Xianqiao Wang; Tianming Liu
Journal:  Cereb Cortex       Date:  2018-03-01       Impact factor: 5.357

5.  Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature.

Authors:  Christophe Destrieux; Bruce Fischl; Anders Dale; Eric Halgren
Journal:  Neuroimage       Date:  2010-06-12       Impact factor: 6.556

6.  Automatic Recognition of fMRI-Derived Functional Networks Using 3-D Convolutional Neural Networks.

Authors:  Yu Zhao; Qinglin Dong; Shu Zhang; Wei Zhang; Hanbo Chen; Xi Jiang; Lei Guo; Xintao Hu; Junwei Han; Tianming Liu
Journal:  IEEE Trans Biomed Eng       Date:  2017-06-15       Impact factor: 4.538

7.  Modeling Task fMRI Data Via Deep Convolutional Autoencoder.

Authors:  Heng Huang; Xintao Hu; Yu Zhao; Milad Makkie; Qinglin Dong; Shijie Zhao; Lei Guo; Tianming Liu
Journal:  IEEE Trans Med Imaging       Date:  2017-06-15       Impact factor: 10.048

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Journal:  Med Image Comput Comput Assist Interv       Date:  2013

9.  Coevolution of gyral folding and structural connection patterns in primate brains.

Authors:  Hanbo Chen; Tuo Zhang; Lei Guo; Kaiming Li; Xiang Yu; Longchuan Li; Xintao Hu; Junwei Han; Xiaoping Hu; Tianming Liu
Journal:  Cereb Cortex       Date:  2012-05-14       Impact factor: 5.357

10.  Elucidating functional differences between cortical gyri and sulci via sparse representation HCP grayordinate fMRI data.

Authors:  Huan Liu; Xi Jiang; Tuo Zhang; Yudan Ren; Xintao Hu; Lei Guo; Junwei Han; Tianming Liu
Journal:  Brain Res       Date:  2017-07-28       Impact factor: 3.252

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  4 in total

1.  An investigation of CNN models for differentiating malignant from benign lesions using small pathologically proven datasets.

Authors:  Shu Zhang; Fangfang Han; Zhengrong Liang; Jiaxing Tan; Weiguo Cao; Yongfeng Gao; Marc Pomeroy; Kenneth Ng; Wei Hou
Journal:  Comput Med Imaging Graph       Date:  2019-08-11       Impact factor: 4.790

2.  Discovering hierarchical common brain networks via multimodal deep belief network.

Authors:  Shu Zhang; Qinglin Dong; Wei Zhang; Heng Huang; Dajiang Zhu; Tianming Liu
Journal:  Med Image Anal       Date:  2019-03-29       Impact factor: 8.545

3.  Temporal Variability of Cortical Gyral-Sulcal Resting State Functional Activity Correlates With Fluid Intelligence.

Authors:  Shimin Yang; Zhongbo Zhao; Han Cui; Tuo Zhang; Lin Zhao; Zhibin He; Huan Liu; Lei Guo; Tianming Liu; Benjamin Becker; Keith M Kendrick; Xi Jiang
Journal:  Front Neural Circuits       Date:  2019-05-15       Impact factor: 3.492

4.  A hybrid learning framework for fine-grained interpretation of brain spatiotemporal patterns during naturalistic functional magnetic resonance imaging.

Authors:  Sigang Yu; Enze Shi; Ruoyang Wang; Shijie Zhao; Tianming Liu; Xi Jiang; Shu Zhang
Journal:  Front Hum Neurosci       Date:  2022-09-30       Impact factor: 3.473

  4 in total

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