Literature DB >> 22119005

Consistent reconstruction of cortical surfaces from longitudinal brain MR images.

Gang Li1, Jingxin Nie, Guorong Wu, Yaping Wang, Dinggang Shen.   

Abstract

Accurate and consistent reconstruction of cortical surfaces from longitudinal human brain MR images is of great importance in studying longitudinal subtle change of the cerebral cortex. This paper presents a novel deformable surface method for consistent and accurate reconstruction of inner, central and outer cortical surfaces from longitudinal brain MR images. Specifically, the cortical surfaces of the group-mean image of all aligned longitudinal images of the same subject are first reconstructed by a deformable surface method, which is driven by a force derived from the Laplace's equation. And then the longitudinal cortical surfaces are consistently reconstructed by jointly deforming the cortical surfaces of the group-mean image to all longitudinal images. The proposed method has been successfully applied to two sets of longitudinal human brain MR images. Both qualitative and quantitative experimental results demonstrate the accuracy and consistency of the proposed method. Furthermore, the reconstructed longitudinal cortical surfaces are used to measure the longitudinal changes of cortical thickness in both normal and diseased groups, where the overall decline trend of cortical thickness has been clearly observed. Meanwhile, the longitudinal cortical thickness also shows its potential in distinguishing different clinical groups.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22119005      PMCID: PMC3288171          DOI: 10.1016/j.neuroimage.2011.11.012

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  63 in total

1.  Longitudinal magnetic resonance imaging studies of older adults: a shrinking brain.

Authors:  Susan M Resnick; Dzung L Pham; Michael A Kraut; Alan B Zonderman; Christos Davatzikos
Journal:  J Neurosci       Date:  2003-04-15       Impact factor: 6.167

2.  CRUISE: cortical reconstruction using implicit surface evolution.

Authors:  Xiao Han; Dzung L Pham; Duygu Tosun; Maryam E Rettmann; Chenyang Xu; Jerry L Prince
Journal:  Neuroimage       Date:  2004-11       Impact factor: 6.556

3.  CLASSIC: consistent longitudinal alignment and segmentation for serial image computing.

Authors:  Zhong Xue; Dinggang Shen; Christos Davatzikos
Journal:  Neuroimage       Date:  2005-11-04       Impact factor: 6.556

4.  Consistent 4D cortical thickness measurement for longitudinal neuroimaging study.

Authors:  Yang Li; Yaping Wang; Zhong Xue; Feng Shi; Weili Lin; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

5.  Geometrically accurate topology-correction of cortical surfaces using nonseparating loops.

Authors:  Florent Ségonne; Jenni Pacheco; Bruce Fischl
Journal:  IEEE Trans Med Imaging       Date:  2007-04       Impact factor: 10.048

6.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

7.  CoRPORATE: cortical reconstruction by pruning outliers with Reeb analysis and topology-preserving evolution.

Authors:  Yonggang Shi; Rongjie Lai; Arthur W Toga
Journal:  Inf Process Med Imaging       Date:  2011

8.  Subregional neuroanatomical change as a biomarker for Alzheimer's disease.

Authors:  Dominic Holland; James B Brewer; Donald J Hagler; Christine Fennema-Notestine; Christine Fenema-Notestine; Anders M Dale
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-08       Impact factor: 11.205

9.  Reconstruction of central cortical surface from brain MRI images: method and application.

Authors:  Tianming Liu; Jingxin Nie; Ashley Tarokh; Lei Guo; Stephen T C Wong
Journal:  Neuroimage       Date:  2007-12-27       Impact factor: 6.556

10.  Automatic cortical sulcal parcellation based on surface principal direction flow field tracking.

Authors:  Gang Li; Lei Guo; Jingxin Nie; Tianming Liu
Journal:  Neuroimage       Date:  2009-03-25       Impact factor: 6.556

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  56 in total

1.  Cortical thickness and surface area in neonates at high risk for schizophrenia.

Authors:  Gang Li; Li Wang; Feng Shi; Amanda E Lyall; Mihye Ahn; Ziwen Peng; Hongtu Zhu; Weili Lin; John H Gilmore; Dinggang Shen
Journal:  Brain Struct Funct       Date:  2014-11-02       Impact factor: 3.270

2.  Cortical Structure and Cognition in Infants and Toddlers.

Authors:  Jessica B Girault; Emil Cornea; Barbara D Goldman; Shaili C Jha; Veronica A Murphy; Gang Li; Li Wang; Dinggang Shen; Rebecca C Knickmeyer; Martin Styner; John H Gilmore
Journal:  Cereb Cortex       Date:  2020-03-21       Impact factor: 5.357

3.  The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction.

Authors:  Antonios Makropoulos; Emma C Robinson; Andreas Schuh; Robert Wright; Sean Fitzgibbon; Jelena Bozek; Serena J Counsell; Johannes Steinweg; Katy Vecchiato; Jonathan Passerat-Palmbach; Gregor Lenz; Filippo Mortari; Tencho Tenev; Eugene P Duff; Matteo Bastiani; Lucilio Cordero-Grande; Emer Hughes; Nora Tusor; Jacques-Donald Tournier; Jana Hutter; Anthony N Price; Rui Pedro A G Teixeira; Maria Murgasova; Suresh Victor; Christopher Kelly; Mary A Rutherford; Stephen M Smith; A David Edwards; Joseph V Hajnal; Mark Jenkinson; Daniel Rueckert
Journal:  Neuroimage       Date:  2018-01-31       Impact factor: 6.556

4.  Simultaneous and consistent labeling of longitudinal dynamic developing cortical surfaces in infants.

Authors:  Gang Li; Li Wang; Feng Shi; Weili Lin; Dinggang Shen
Journal:  Med Image Anal       Date:  2014-06-25       Impact factor: 8.545

5.  Parcellation of Infant Surface Atlas Using Developmental Trajectories of Multidimensional Cortical Attributes.

Authors:  Gang Li; Li Wang; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2015-11-18

6.  Construction of 4D infant cortical surface atlases with sharp folding patterns via spherical patch-based group-wise sparse representation.

Authors:  Zhengwang Wu; Li Wang; Weili Lin; John H Gilmore; Gang Li; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2019-05-21       Impact factor: 5.038

7.  Genetic influences on neonatal cortical thickness and surface area.

Authors:  Shaili C Jha; Kai Xia; James Eric Schmitt; Mihye Ahn; Jessica B Girault; Veronica A Murphy; Gang Li; Li Wang; Dinggang Shen; Fei Zou; Hongtu Zhu; Martin Styner; Rebecca C Knickmeyer; John H Gilmore
Journal:  Hum Brain Mapp       Date:  2018-08-24       Impact factor: 5.038

8.  Predicting infant cortical surface development using a 4D varifold-based learning framework and local topography-based shape morphing.

Authors:  Islem Rekik; Gang Li; Weili Lin; Dinggang Shen
Journal:  Med Image Anal       Date:  2015-11-10       Impact factor: 8.545

9.  Development of cortical anatomical properties from early childhood to early adulthood.

Authors:  Jingxin Nie; Gang Li; Dinggang Shen
Journal:  Neuroimage       Date:  2013-03-21       Impact factor: 6.556

10.  Integration of sparse multi-modality representation and anatomical constraint for isointense infant brain MR image segmentation.

Authors:  Li Wang; Feng Shi; Yaozong Gao; Gang Li; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2013-11-28       Impact factor: 6.556

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