Literature DB >> 18287003

Splicing promotes rapid and efficient mRNA export in mammalian cells.

Patricia Valencia1, Anusha P Dias, Robin Reed.   

Abstract

The numerous steps in protein gene expression are extensively coupled to one another through complex networks of physical and functional interactions. Indeed, >25 coupled reactions, often reciprocal, have been documented among such steps as transcription, capping, splicing, and polyadenylation. Coupling is usually not essential for gene expression, but instead enhances the rate and/or efficiency of reactions and, physiologically, may serve to increase the fidelity of gene expression. Despite numerous examples of coupling in gene expression, whether splicing enhances mRNA export still remains controversial. Although splicing was originally reported to promote export in both mammalian cells and Xenopus oocytes, it was subsequently concluded that this was not the case. These newer conclusions were surprising in light of the observations that the mRNA export machinery colocalizes with splicing factors in the nucleus and that splicing promotes recruitment of the export machinery to mRNA. We therefore reexamined the relationship between splicing and mRNA export in mammalian cells by using FISH, in combination with either transfection or nuclear microinjection of plasmid DNA. Together, these analyses indicate that both the kinetics and efficiency of mRNA export are enhanced 6- to 10-fold (depending on the construct) for spliced mRNAs relative to their cDNA counterparts. We conclude that splicing promotes mRNA export in mammalian cells and that the functional coupling between splicing and mRNA export is a conserved and general feature of gene expression in higher eukaryotes.

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Year:  2008        PMID: 18287003      PMCID: PMC2265164          DOI: 10.1073/pnas.0800250105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Splicing is required for rapid and efficient mRNA export in metazoans.

Authors:  M J Luo; R Reed
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

2.  The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.

Authors:  H Le Hir; D Gatfield; E Izaurralde; M J Moore
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

Review 3.  An extensive network of coupling among gene expression machines.

Authors:  Tom Maniatis; Robin Reed
Journal:  Nature       Date:  2002-04-04       Impact factor: 49.962

4.  Identity elements used in export of mRNAs.

Authors:  Mutsuhito Ohno; Alexandra Segref; Scott Kuersten; Iain W Mattaj
Journal:  Mol Cell       Date:  2002-03       Impact factor: 17.970

5.  Comprehensive proteomic analysis of the human spliceosome.

Authors:  Zhaolan Zhou; Lawrence J Licklider; Steven P Gygi; Robin Reed
Journal:  Nature       Date:  2002-09-12       Impact factor: 49.962

6.  Intron-dependent stimulation of marker gene expression in cultured insect cells.

Authors:  H Zieler; C Q Huynh
Journal:  Insect Mol Biol       Date:  2002-02       Impact factor: 3.585

7.  A quantitative analysis of intron effects on mammalian gene expression.

Authors:  Ajit Nott; Shlomo H Meislin; Melissa J Moore
Journal:  RNA       Date:  2003-05       Impact factor: 4.942

8.  Analysis of the stimulatory effect of splicing on mRNA production and utilization in mammalian cells.

Authors:  Shihua Lu; Bryan R Cullen
Journal:  RNA       Date:  2003-05       Impact factor: 4.942

9.  REF proteins mediate the export of spliced and unspliced mRNAs from the nucleus.

Authors:  J P Rodrigues; M Rode; D Gatfield; B J Blencowe; M Carmo-Fonseca; E Izaurralde
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-23       Impact factor: 11.205

10.  The signal sequence coding region promotes nuclear export of mRNA.

Authors:  Alexander F Palazzo; Michael Springer; Yoko Shibata; Chung-Sheng Lee; Anusha P Dias; Tom A Rapoport
Journal:  PLoS Biol       Date:  2007-12       Impact factor: 8.029

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  117 in total

Review 1.  Cell-context dependent TCF/LEF expression and function: alternative tales of repression, de-repression and activation potentials.

Authors:  Catherine D Mao; Stephen W Byers
Journal:  Crit Rev Eukaryot Gene Expr       Date:  2011       Impact factor: 1.807

2.  Export and stability of naturally intronless mRNAs require specific coding region sequences and the TREX mRNA export complex.

Authors:  Haixin Lei; Anusha P Dias; Robin Reed
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-18       Impact factor: 11.205

3.  Dynamics of single mRNP nucleocytoplasmic transport and export through the nuclear pore in living cells.

Authors:  Amir Mor; Shimrit Suliman; Rakefet Ben-Yishay; Sharon Yunger; Yehuda Brody; Yaron Shav-Tal
Journal:  Nat Cell Biol       Date:  2010-05-09       Impact factor: 28.824

Review 4.  The multitasking polyA tail: nuclear RNA maturation, degradation and export.

Authors:  Agnieszka Tudek; Marta Lloret-Llinares; Torben Heick Jensen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

5.  The A- and B-type nuclear lamin networks: microdomains involved in chromatin organization and transcription.

Authors:  Takeshi Shimi; Katrin Pfleghaar; Shin-ichiro Kojima; Chan-Gi Pack; Irina Solovei; Anne E Goldman; Stephen A Adam; Dale K Shumaker; Masataka Kinjo; Thomas Cremer; Robert D Goldman
Journal:  Genes Dev       Date:  2008-12-15       Impact factor: 11.361

6.  An insulator with barrier-element activity promotes alpha-spectrin gene expression in erythroid cells.

Authors:  Patrick G Gallagher; Douglas G Nilson; Laurie A Steiner; Yelena D Maksimova; Jolinta Y Lin; David M Bodine
Journal:  Blood       Date:  2008-11-13       Impact factor: 22.113

7.  Functional Dissection of an Alternatively Spliced Herpesvirus Gene by Splice Site Mutagenesis.

Authors:  Tim Schommartz; Stefan Loroch; Malik Alawi; Adam Grundhoff; Albert Sickmann; Wolfram Brune
Journal:  J Virol       Date:  2016-04-14       Impact factor: 5.103

8.  Influenza virus mRNA trafficking through host nuclear speckles.

Authors:  Amir Mor; Alexander White; Ke Zhang; Matthew Thompson; Matthew Esparza; Raquel Muñoz-Moreno; Kazunori Koide; Kristen W Lynch; Adolfo García-Sastre; Beatriz M A Fontoura
Journal:  Nat Microbiol       Date:  2016-05-27       Impact factor: 17.745

9.  Regulation of CD45 alternative splicing by heterogeneous ribonucleoprotein, hnRNPLL.

Authors:  Shalini Oberdoerffer; Luis Ferreira Moita; Daniel Neems; Rui P Freitas; Nir Hacohen; Anjana Rao
Journal:  Science       Date:  2008-07-10       Impact factor: 47.728

10.  Role of RNA splicing in mediating lineage-specific expression of the von Willebrand factor gene in the endothelium.

Authors:  Lei Yuan; Lauren Janes; David Beeler; Katherine C Spokes; Joshua Smith; Dan Li; Shou-Ching Jaminet; Peter Oettgen; William C Aird
Journal:  Blood       Date:  2013-03-25       Impact factor: 22.113

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