Literature DB >> 18281715

miRNAs: effectors of environmental influences on gene expression and disease.

Alice Hudder1, Raymond F Novak.   

Abstract

Discovered less than a decade ago, micro-RNAs (miRNAs) have emerged as important regulators of gene expression in mammals. They consist of short nucleic acids, on average approximately 22 nucleotides in length. The miRNAs exert their effect by binding directly to target messenger RNAs (mRNAs) and inhibiting mRNA stability and translation. Each miRNA can bind to multiple targets and many miRNAs can bind to the same target mRNA, allowing for a complex pattern of regulation of gene expression. Once bound to their targets, miRNAs can suppress translation of the mRNA by either sequestration or degradation of the message. Thus, miRNAs function as powerful and sensitive posttranscriptional regulators of gene expression. This review will summarize what is known about miRNA biogenesis, expression, regulation, function, mode of action, and role in disease processes with an emphasis on miRNAs in mammals. We discuss some of the methodology employed in miRNA research and the potential of miRNAs as therapeutic targets. The role of miRNAs in signal transduction and cellular stress is reviewed. Lastly, we identify new exciting avenues of research on the role of miRNAs in toxicogenomics and the possibility of epigenetic effects on gene expression.

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Year:  2008        PMID: 18281715      PMCID: PMC2922762          DOI: 10.1093/toxsci/kfn033

Source DB:  PubMed          Journal:  Toxicol Sci        ISSN: 1096-0929            Impact factor:   4.849


  132 in total

Review 1.  MicroRNAs: genomics, biogenesis, mechanism, and function.

Authors:  David P Bartel
Journal:  Cell       Date:  2004-01-23       Impact factor: 41.582

2.  Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs.

Authors:  Rui Yi; Yi Qin; Ian G Macara; Bryan R Cullen
Journal:  Genes Dev       Date:  2003-12-17       Impact factor: 11.361

Review 3.  microRNAs join the p53 network--another piece in the tumour-suppression puzzle.

Authors:  Lin He; Xingyue He; Scott W Lowe; Gregory J Hannon
Journal:  Nat Rev Cancer       Date:  2007-11       Impact factor: 60.716

Review 4.  Specialization and evolution of endogenous small RNA pathways.

Authors:  Elisabeth J Chapman; James C Carrington
Journal:  Nat Rev Genet       Date:  2007-11       Impact factor: 53.242

Review 5.  Genome-wide analysis of mRNA polysomal profiles with spotted DNA microarrays.

Authors:  Daniel Melamed; Yoav Arava
Journal:  Methods Enzymol       Date:  2007       Impact factor: 1.600

Review 6.  Methods to analyze microRNA-mediated control of mRNA translation.

Authors:  Jennifer L Clancy; Marco Nousch; David T Humphreys; Belinda J Westman; Traude H Beilharz; Thomas Preiss
Journal:  Methods Enzymol       Date:  2007       Impact factor: 1.600

7.  R2D2, a bridge between the initiation and effector steps of the Drosophila RNAi pathway.

Authors:  Qinghua Liu; Tim A Rand; Savitha Kalidas; Fenghe Du; Hyun-Eui Kim; Dean P Smith; Xiaodong Wang
Journal:  Science       Date:  2003-09-26       Impact factor: 47.728

8.  Changes of micro-RNA expression in rat liver treated by acetaminophen or carbon tetrachloride--regulating role of micro-RNA for RNA expression.

Authors:  Tamio Fukushima; Yoshimasa Hamada; Hiroshi Yamada; Ikuo Horii
Journal:  J Toxicol Sci       Date:  2007-10       Impact factor: 2.196

9.  Overexpression of micro ribonucleic acid 29, highly up-regulated in diabetic rats, leads to insulin resistance in 3T3-L1 adipocytes.

Authors:  Aibin He; Liuluan Zhu; Nishith Gupta; Yongsheng Chang; Fude Fang
Journal:  Mol Endocrinol       Date:  2007-07-24

10.  Identification of Drosophila MicroRNA targets.

Authors:  Alexander Stark; Julius Brennecke; Robert B Russell; Stephen M Cohen
Journal:  PLoS Biol       Date:  2003-10-13       Impact factor: 8.029

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  34 in total

1.  An NF-kappaB-sensitive micro RNA-146a-mediated inflammatory circuit in Alzheimer disease and in stressed human brain cells.

Authors:  Walter J Lukiw; Yuhai Zhao; Jian Guo Cui
Journal:  J Biol Chem       Date:  2008-09-18       Impact factor: 5.157

2.  Ovarian Toxicity and Epigenetic Mechanisms of Phthalates and Their Metabolites.

Authors:  Hua-Hua Jiang; Yao-Yao Du; Yu-Feng Li
Journal:  Curr Med Sci       Date:  2021-04-20

3.  Up-regulation of microRNA 506 leads to decreased Cl-/HCO3- anion exchanger 2 expression in biliary epithelium of patients with primary biliary cirrhosis.

Authors:  Jesús M Banales; Elena Sáez; Miriam Uriz; Sarai Sarvide; Aura D Urribarri; Patrick Splinter; Pamela S Tietz Bogert; Luis Bujanda; Jesús Prieto; Juan F Medina; Nicholas F LaRusso
Journal:  Hepatology       Date:  2012-07-10       Impact factor: 17.425

Review 4.  Molecular targets of epigenetic regulation and effectors of environmental influences.

Authors:  Supratim Choudhuri; Yue Cui; Curtis D Klaassen
Journal:  Toxicol Appl Pharmacol       Date:  2010-04-08       Impact factor: 4.219

5.  Association between occupational exposure to trichloroethylene and serum levels of microRNAs: a cross-sectional molecular epidemiology study in China.

Authors:  Kyoung-Mu Lee; Bryan A Bassig; Luoping Zhang; Roel C Vermeulen; Wei Hu; Jason Y Y Wong; Chuangyi Qiu; Cuiju Wen; Yongshun Huang; Mark P Purdue; Bu-Tian Ji; Laiyu Li; Xiaojiang Tang; Nathaniel Rothman; Martyn T Smith; Qing Lan
Journal:  Int Arch Occup Environ Health       Date:  2019-06-03       Impact factor: 3.015

6.  Insights into insulin-mediated regulation of CYP2E1: miR-132/-212 targeting of CYP2E1 and role of phosphatidylinositol 3-kinase, Akt (protein kinase B), mammalian target of rapamycin signaling in regulating miR-132/-212 and miR-122/-181a expression in primary cultured rat hepatocytes.

Authors:  Upasana Shukla; Nithin Tumma; Theresa Gratsch; Alan Dombkowski; Raymond F Novak
Journal:  Drug Metab Dispos       Date:  2013-08-06       Impact factor: 3.922

7.  Cross-platform analysis of global microRNA expression technologies.

Authors:  Carole L Yauk; Andrea Rowan-Carroll; John Dh Stead; Andrew Williams
Journal:  BMC Genomics       Date:  2010-05-26       Impact factor: 3.969

8.  Paternal transmission of complex phenotypes in inbred mice.

Authors:  Mark D Alter; Ahmed I Gilani; Frances A Champagne; James P Curley; J Blake Turner; Rene Hen
Journal:  Biol Psychiatry       Date:  2009-07-03       Impact factor: 13.382

9.  Effects of short-term exposure to 2,3,7,8-tetrachlorodibenzo-p-dioxin on microRNA expression in zebrafish embryos.

Authors:  Matthew J Jenny; Neelakanteswar Aluru; Mark E Hahn
Journal:  Toxicol Appl Pharmacol       Date:  2012-08-18       Impact factor: 4.219

10.  miR2Disease: a manually curated database for microRNA deregulation in human disease.

Authors:  Qinghua Jiang; Yadong Wang; Yangyang Hao; Liran Juan; Mingxiang Teng; Xinjun Zhang; Meimei Li; Guohua Wang; Yunlong Liu
Journal:  Nucleic Acids Res       Date:  2008-10-15       Impact factor: 16.971

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