Literature DB >> 20381512

Molecular targets of epigenetic regulation and effectors of environmental influences.

Supratim Choudhuri1, Yue Cui, Curtis D Klaassen.   

Abstract

The true understanding of what we currently define as epigenetics evolved over time as our knowledge on DNA methylation and chromatin modifications and their effects on gene expression increased. The current explosion of research on epigenetics and the increasing documentation of the effects of various environmental factors on DNA methylation, chromatin modification, as well as on the expression of small non-coding RNAs (ncRNAs) have expanded the scope of research on the etiology of various diseases including cancer. The current review briefly discusses the molecular mechanisms of epigenetic regulation and expands the discussion with examples on the role of environment, such as the immediate environment during development, in inducing epigenetic changes and modulating gene expression. Published by Elsevier Inc.

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Year:  2010        PMID: 20381512      PMCID: PMC2911443          DOI: 10.1016/j.taap.2010.03.022

Source DB:  PubMed          Journal:  Toxicol Appl Pharmacol        ISSN: 0041-008X            Impact factor:   4.219


  116 in total

1.  Chromosomal silencing and localization are mediated by different domains of Xist RNA.

Authors:  Anton Wutz; Theodore P Rasmussen; Rudolf Jaenisch
Journal:  Nat Genet       Date:  2002-01-07       Impact factor: 38.330

2.  Chromosomal instability and tumors promoted by DNA hypomethylation.

Authors:  Amir Eden; François Gaudet; Alpana Waghmare; Rudolf Jaenisch
Journal:  Science       Date:  2003-04-18       Impact factor: 47.728

3.  Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4.

Authors:  Michiel Vermeulen; Klaas W Mulder; Sergei Denissov; W W M Pim Pijnappel; Frederik M A van Schaik; Radhika A Varier; Marijke P A Baltissen; Henk G Stunnenberg; Matthias Mann; H Th Marc Timmers
Journal:  Cell       Date:  2007-09-20       Impact factor: 41.582

4.  Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.

Authors:  Nathaniel D Heintzman; Rhona K Stuart; Gary Hon; Yutao Fu; Christina W Ching; R David Hawkins; Leah O Barrera; Sara Van Calcar; Chunxu Qu; Keith A Ching; Wei Wang; Zhiping Weng; Roland D Green; Gregory E Crawford; Bing Ren
Journal:  Nat Genet       Date:  2007-02-04       Impact factor: 38.330

5.  Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a.

Authors:  B H Ramsahoye; D Biniszkiewicz; F Lyko; V Clark; A P Bird; R Jaenisch
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

Review 6.  CpG island methylator phenotype in cancer.

Authors:  Jean-Pierre Issa
Journal:  Nat Rev Cancer       Date:  2004-12       Impact factor: 60.716

7.  Vinclozolin--the lack of a transgenerational effect after oral maternal exposure during organogenesis.

Authors:  Steffen Schneider; Wolfgang Kaufmann; Roland Buesen; Bennard van Ravenzwaay
Journal:  Reprod Toxicol       Date:  2008-04-09       Impact factor: 3.143

8.  Mutation and cancer: statistical study of retinoblastoma.

Authors:  A G Knudson
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

9.  Coordinated activation of candidate proto-oncogenes and cancer testes antigens via promoter demethylation in head and neck cancer and lung cancer.

Authors:  Ian M Smith; Chad A Glazer; Suhail K Mithani; Michael F Ochs; Wenyue Sun; Sheetal Bhan; Alexander Vostrov; Ziedulla Abdullaev; Victor Lobanenkov; Andrew Gray; Chunyan Liu; Steven S Chang; Kimberly L Ostrow; William H Westra; Shahnaz Begum; Mousumi Dhara; Joseph Califano
Journal:  PLoS One       Date:  2009-03-23       Impact factor: 3.240

10.  Transgenerational epigenetic programming of the brain transcriptome and anxiety behavior.

Authors:  Michael K Skinner; Matthew D Anway; Marina I Savenkova; Andrea C Gore; David Crews
Journal:  PLoS One       Date:  2008-11-18       Impact factor: 3.240

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  41 in total

Review 1.  Diet, the gut microbiome, and epigenetics.

Authors:  Meredith A J Hullar; Benjamin C Fu
Journal:  Cancer J       Date:  2014 May-Jun       Impact factor: 3.360

Review 2.  Epigenetic alterations in ultraviolet radiation-induced skin carcinogenesis: interaction of bioactive dietary components on epigenetic targets.

Authors:  Santosh K Katiyar; Tripti Singh; Ram Prasad; Qian Sun; Mudit Vaid
Journal:  Photochem Photobiol       Date:  2011-11-17       Impact factor: 3.421

Review 3.  Epigenetics and its implications for ecotoxicology.

Authors:  Michiel B Vandegehuchte; Colin R Janssen
Journal:  Ecotoxicology       Date:  2011-03-22       Impact factor: 2.823

4.  Ovarian Toxicity and Epigenetic Mechanisms of Phthalates and Their Metabolites.

Authors:  Hua-Hua Jiang; Yao-Yao Du; Yu-Feng Li
Journal:  Curr Med Sci       Date:  2021-04-20

Review 5.  Maternal smoking as a model for environmental epigenetic changes affecting birthweight and fetal programming.

Authors:  Melissa A Suter; Amber M Anders; Kjersti M Aagaard
Journal:  Mol Hum Reprod       Date:  2012-11-08       Impact factor: 4.025

Review 6.  The estrogenic endocrine disrupting chemical bisphenol A (BPA) and obesity.

Authors:  Frederick S Vom Saal; Susan C Nagel; Benjamin L Coe; Brittany M Angle; Julia A Taylor
Journal:  Mol Cell Endocrinol       Date:  2012-01-10       Impact factor: 4.102

Review 7.  Epigenetic influence of environmentally neurotoxic metals.

Authors:  Omamuyovwi M Ijomone; Olayemi K Ijomone; Joy D Iroegbu; Chibuzor W Ifenatuoha; Nzube F Olung; Michael Aschner
Journal:  Neurotoxicology       Date:  2020-09-01       Impact factor: 4.294

Review 8.  From Classical Toxicology to Tox21: Some Critical Conceptual and Technological Advances in the Molecular Understanding of the Toxic Response Beginning From the Last Quarter of the 20th Century.

Authors:  Supratim Choudhuri; Geoffrey W Patton; Ronald F Chanderbhan; Antonia Mattia; Curtis D Klaassen
Journal:  Toxicol Sci       Date:  2018-01-01       Impact factor: 4.849

Review 9.  The fate is not always written in the genes: epigenomics in epidemiologic studies.

Authors:  Scott M Langevin; Karl T Kelsey
Journal:  Environ Mol Mutagen       Date:  2013-02-26       Impact factor: 3.216

10.  Effects on specific promoter DNA methylation in zebrafish embryos and larvae following benzo[a]pyrene exposure.

Authors:  J Corrales; X Fang; C Thornton; W Mei; W B Barbazuk; M Duke; B E Scheffler; K L Willett
Journal:  Comp Biochem Physiol C Toxicol Pharmacol       Date:  2014-02-24       Impact factor: 3.228

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