Literature DB >> 17943195

Specialization and evolution of endogenous small RNA pathways.

Elisabeth J Chapman1, James C Carrington.   

Abstract

The specificity of RNA silencing is conferred by small RNA guides that are processed from structured RNA or dsRNA. The core components for small RNA biogenesis and effector functions have proliferated and specialized in eukaryotic lineages, resulting in diversified pathways that control expression of endogenous and exogenous genes, invasive elements and viruses, and repeated sequences. Deployment of small RNA pathways for spatiotemporal regulation of the transcriptome has shaped the evolution of eukaryotic genomes and contributed to the complexity of multicellular organisms.

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Year:  2007        PMID: 17943195     DOI: 10.1038/nrg2179

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  266 in total

1.  Nucleus-localized antisense small RNAs with 5'-polyphosphate termini regulate long term transcriptional gene silencing in Entamoeba histolytica G3 strain.

Authors:  Hanbang Zhang; Hussein Alramini; Vy Tran; Upinder Singh
Journal:  J Biol Chem       Date:  2011-11-02       Impact factor: 5.157

Review 2.  MicroRNAs in trees.

Authors:  Ying-Hsuan Sun; Rui Shi; Xing-Hai Zhang; Vincent L Chiang; Ronald R Sederoff
Journal:  Plant Mol Biol       Date:  2011-12-08       Impact factor: 4.076

3.  DNA methylation and demethylation in Arabidopsis.

Authors:  Mary Gehring; Steven Henikoff
Journal:  Arabidopsis Book       Date:  2008-05-23

Review 4.  Conservation and divergence in plant microRNAs.

Authors:  Matthew W Jones-Rhoades
Journal:  Plant Mol Biol       Date:  2011-10-14       Impact factor: 4.076

Review 5.  Non-coding RNAs in the plant response to abiotic stress.

Authors:  Cecilia Contreras-Cubas; Miguel Palomar; Mario Arteaga-Vázquez; José Luis Reyes; Alejandra A Covarrubias
Journal:  Planta       Date:  2012-07-04       Impact factor: 4.116

Review 6.  The role of miRNAs and endogenous siRNAs in maternal-to-zygotic reprogramming and the establishment of pluripotency.

Authors:  Petr Svoboda; Matyas Flemr
Journal:  EMBO Rep       Date:  2010-07-23       Impact factor: 8.807

7.  Two antisense RNAs target the transcriptional regulator CsgD to inhibit curli synthesis.

Authors:  Erik Holmqvist; Johan Reimegård; Maaike Sterk; Nina Grantcharova; Ute Römling; Eduard Gerhart Heinrich Wagner
Journal:  EMBO J       Date:  2010-04-20       Impact factor: 11.598

8.  Computational identification of microRNAs and their targets from the expressed sequence tags of horsegram (Macrotyloma uniflorum (Lam.) Verdc.).

Authors:  Jyoti Bhardwaj; Hasan Mohammad; Sudesh Kumar Yadav
Journal:  J Struct Funct Genomics       Date:  2010-10-27

9.  Why mouse oocytes and early embryos ignore miRNAs?

Authors:  Petr Svoboda
Journal:  RNA Biol       Date:  2010-09-01       Impact factor: 4.652

Review 10.  MicroRNAs in normal and psoriatic skin.

Authors:  Jing Xia; Weixiong Zhang
Journal:  Physiol Genomics       Date:  2013-12-10       Impact factor: 3.107

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