Literature DB >> 18248009

Quasihomogeneous nucleation of amyloid beta yields numerical bounds for the critical radius, the surface tension, and the free energy barrier for nucleus formation.

K Garai1, B Sahoo, P Sengupta, S Maiti.   

Abstract

Amyloid aggregates are believed to grow through a nucleation mediated pathway, but important aggregation parameters, such as the nucleation radius, the surface tension of the aggregate, and the free energy barrier toward aggregation, have remained difficult to measure. Homogeneous nucleation theory, if applicable, can directly relate these parameters to measurable quantities. We employ fluorescence correlation spectroscopy to measure the particle size distribution in an aggregating solution of Alzheimer's amyloid beta molecule (Abeta(1-40)) and analyze the data from a homogeneous nucleation theory perspective. We observe a reproducible saturation concentration and a critical dependence of various aspects of the aggregation process on this saturation concentration, which supports the applicability of the nucleation theory to Abeta aggregation. The measured size distributions show a valley between two peaks ranging from 5 to 50 nm, which defines a boundary for the value of the nucleation radius. By carefully controlling the conditions to inhibit heterogeneous nucleation, we can hold off nucleation in a 25 times supersaturated solution for at least up to 3 h at room temperature. This quasi-homogeneous kinetics implies that at room temperature, the surface energy of the Abeta/water interface is > or =4.8 mJ/m(2), the free energy barrier to nucleation (at 25 times supersaturation) is > or =1.93x10(-19) J, and the number of monomers in the nucleus is > or =29.

Entities:  

Year:  2008        PMID: 18248009     DOI: 10.1063/1.2822322

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  17 in total

1.  Size distribution of amyloid nanofibrils.

Authors:  Raffaela Cabriolu; Dimo Kashchiev; Stefan Auer
Journal:  Biophys J       Date:  2011-11-01       Impact factor: 4.033

2.  Measurement of the attachment and assembly of small amyloid-β oligomers on live cell membranes at physiological concentrations using single-molecule tools.

Authors:  Suman Nag; Jiji Chen; J Irudayaraj; S Maiti
Journal:  Biophys J       Date:  2010-09-22       Impact factor: 4.033

3.  Protein Polymerization into Fibrils from the Viewpoint of Nucleation Theory.

Authors:  Dimo Kashchiev
Journal:  Biophys J       Date:  2015-11-17       Impact factor: 4.033

4.  Simulations of nucleation and elongation of amyloid fibrils.

Authors:  Jianing Zhang; M Muthukumar
Journal:  J Chem Phys       Date:  2009-01-21       Impact factor: 3.488

5.  Unmasking the roles of N- and C-terminal flanking sequences from exon 1 of huntingtin as modulators of polyglutamine aggregation.

Authors:  Scott L Crick; Kiersten M Ruff; Kanchan Garai; Carl Frieden; Rohit V Pappu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-26       Impact factor: 11.205

6.  On the stability of the soluble amyloid aggregates.

Authors:  Bankanidhi Sahoo; Suman Nag; Parijat Sengupta; Sudipta Maiti
Journal:  Biophys J       Date:  2009-09-02       Impact factor: 4.033

Review 7.  Amyloid β Protein and Alzheimer's Disease: When Computer Simulations Complement Experimental Studies.

Authors:  Jessica Nasica-Labouze; Phuong H Nguyen; Fabio Sterpone; Olivia Berthoumieu; Nicolae-Viorel Buchete; Sébastien Coté; Alfonso De Simone; Andrew J Doig; Peter Faller; Angel Garcia; Alessandro Laio; Mai Suan Li; Simone Melchionna; Normand Mousseau; Yuguang Mu; Anant Paravastu; Samuela Pasquali; David J Rosenman; Birgit Strodel; Bogdan Tarus; John H Viles; Tong Zhang; Chunyu Wang; Philippe Derreumaux
Journal:  Chem Rev       Date:  2015-03-19       Impact factor: 60.622

8.  A first order phase transition mechanism underlies protein aggregation in mammalian cells.

Authors:  Arjun Narayanan; Anatoli Meriin; J Owen Andrews; Jan-Hendrik Spille; Michael Y Sherman; Ibrahim I Cisse
Journal:  Elife       Date:  2019-02-04       Impact factor: 8.140

9.  Thermodynamic phase diagram of amyloid-β (16-22) peptide.

Authors:  Yiming Wang; Samuel J Bunce; Sheena E Radford; Andrew J Wilson; Stefan Auer; Carol K Hall
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-23       Impact factor: 11.205

10.  Pyroglutamate-Modified Amyloid-β(3-42) Shows α-Helical Intermediates before Amyloid Formation.

Authors:  Christina Dammers; Kerstin Reiss; Lothar Gremer; Justin Lecher; Tamar Ziehm; Matthias Stoldt; Melanie Schwarten; Dieter Willbold
Journal:  Biophys J       Date:  2017-04-25       Impact factor: 4.033

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