Literature DB >> 18239913

Hydration dependent dynamics in sol-gel encapsulated myoglobin.

Giorgio Schirò1, Michele Sclafani, Francesca Natali, Antonio Cupane.   

Abstract

In this work we study the effect of hydration on the dynamics of a protein in confined geometry, i.e. encapsulated in a porous silica matrix. Using elastic neutron scattering we investigate the temperature dependence of the mean square displacements of non-exchangeable hydrogen atoms of sol-gel encapsulated met-myoglobin. The study is extended to samples at 0.2, 0.3 and 0.5 g water/g protein fractions and comparison is made with met-myoglobin powders at the same average hydration and with a dry powder sample. Elastic data are analysed using a model of dynamical heterogeneity to take into account deviations of elastic intensity from gaussian behaviour in a large momentum transfer range and reveal a specific, model independent, effect of sol-gel confinement on protein dynamics, consisting mainly in a reduction of large-scale motions that are activated at temperatures larger than approximately 230 K. Surprisingly, the effect of confinement depends markedly on hydration and has a maximum at about 35% water/protein fraction corresponding to full first shell hydration. The presence of hydration-dependent MSD also in encapsulated met-Mb strongly supports the idea that the effect of sol-gel confinement on protein dynamics involves a modification of the structural/dynamical properties of the co-encapsulated solvent more than direct protein-matrix interactions.

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Year:  2008        PMID: 18239913     DOI: 10.1007/s00249-007-0249-9

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  31 in total

1.  Slaving: solvent fluctuations dominate protein dynamics and functions.

Authors:  P W Fenimore; H Frauenfelder; B H McMahon; F G Parak
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-20       Impact factor: 11.205

2.  Cell biology: join the crowd.

Authors:  R John Ellis; Allen P Minton
Journal:  Nature       Date:  2003-09-04       Impact factor: 49.962

3.  Effect of the environment on the protein dynamical transition: a neutron scattering study.

Authors:  Alessandro Paciaroni; Stefania Cinelli; Giuseppe Onori
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

4.  Glassy behavior of a protein.

Authors: 
Journal:  Phys Rev Lett       Date:  1989-04-17       Impact factor: 9.161

5.  Onsets of anharmonicity in protein dynamics.

Authors:  J H Roh; V N Novikov; R B Gregory; J E Curtis; Z Chowdhuri; A P Sokolov
Journal:  Phys Rev Lett       Date:  2005-07-12       Impact factor: 9.161

6.  Controlling the protein dynamical transition with sugar-based bioprotectant matrices: a neutron scattering study.

Authors:  E Cornicchi; M Marconi; G Onori; A Paciaroni
Journal:  Biophys J       Date:  2006-04-14       Impact factor: 4.033

7.  Dynamic transition in tRNA is solvent induced.

Authors:  Gokhan Caliskan; Robert M Briber; D Thirumalai; Victoria Garcia-Sakai; Sarah A Woodson; Alexei P Sokolov
Journal:  J Am Chem Soc       Date:  2006-01-11       Impact factor: 15.419

8.  Temperature- and hydration-dependent protein dynamics in photosystem II of green plants studied by quasielastic neutron scattering.

Authors:  Jörg Pieper; Thomas Hauss; Alexandra Buchsteiner; Krzysztof Baczyński; Karolina Adamiak; Ruep E Lechner; Gernot Renger
Journal:  Biochemistry       Date:  2007-09-15       Impact factor: 3.162

9.  Thermal motions and function of bacteriorhodopsin in purple membranes: effects of temperature and hydration studied by neutron scattering.

Authors:  M Ferrand; A J Dianoux; W Petry; G Zaccaï
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-15       Impact factor: 11.205

Review 10.  Protein-water displacement distributions.

Authors:  Wolfgang Doster; Marcus Settles
Journal:  Biochim Biophys Acta       Date:  2005-04-09
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