Literature DB >> 18207165

Phyllotaxis: cooperation and competition between mechanical and biochemical processes.

Alan C Newell1, Patrick D Shipman, Zhiying Sun.   

Abstract

Current theories and models of the formation of phyllotactic patterns at plant apical meristems center on either transport of the growth hormone auxin or the mechanical buckling of the plant tunica. By deriving a continuum approximation of an existing discrete biochemical model and comparing it with a mechanical model, we show that the model partial differential equations are similar in form. The implications of this universality in the form of the equations on interpreting the results of simulations are discussed. We develop a combined model that incorporates the coupling of biochemistry and mechanics. The combined model is accessible to analysis by reduction to a set of ordinary differential equations for the amplitudes of shapes associated with both the auxin concentration field and plant surface deformation. Analysis of these amplitude equations reveals the parameter choices under which the two mechanisms may cooperate in determining the pattern, or under which one or the other mechanism may dominate.

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Year:  2007        PMID: 18207165     DOI: 10.1016/j.jtbi.2007.11.036

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  26 in total

1.  A model for leaf initiation: determination of phyllotaxis by waves in the generative circle.

Authors:  Barbara Abraham-Shrauner; Barbara G Pickard
Journal:  Plant Signal Behav       Date:  2011-11

2.  Quantitative predictions on auxin-induced polar distribution of PIN proteins during vein formation in leaves.

Authors:  K Alim; E Frey
Journal:  Eur Phys J E Soft Matter       Date:  2010-06-22       Impact factor: 1.890

3.  Finding simplicity in complexity: general principles of biological and nonbiological organization.

Authors:  Jose L Perez Velazquez
Journal:  J Biol Phys       Date:  2009-04-04       Impact factor: 1.365

4.  Phyllotaxis as an example of the symbiosis of mechanical forces and biochemical processes in living tissue.

Authors:  Alan C Newell; Patrick D Shipman; Zhiying Sun
Journal:  Plant Signal Behav       Date:  2008-08

Review 5.  Modeling auxin-regulated development.

Authors:  Pawel Krupinski; Henrik Jönsson
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-02       Impact factor: 10.005

6.  Localized auxin peaks in concentration-based transport models of the shoot apical meristem.

Authors:  Delphine Draelants; Daniele Avitabile; Wim Vanroose
Journal:  J R Soc Interface       Date:  2015-05-06       Impact factor: 4.118

7.  Pattern formation in auxin flux.

Authors:  C Feller; J P Gabriel; C Mazza; F Yerly
Journal:  J Math Biol       Date:  2013-02-23       Impact factor: 2.259

Review 8.  Understanding the role of floral development in the evolution of angiosperm flowers: clarifications from a historical and physico-dynamic perspective.

Authors:  Louis Ronse De Craene
Journal:  J Plant Res       Date:  2018-03-27       Impact factor: 2.629

Review 9.  Computational morphodynamics: a modeling framework to understand plant growth.

Authors:  Vijay Chickarmane; Adrienne H K Roeder; Paul T Tarr; Alexandre Cunha; Cory Tobin; Elliot M Meyerowitz
Journal:  Annu Rev Plant Biol       Date:  2010       Impact factor: 26.379

10.  Stochastic and deterministic multiscale models for systems biology: an auxin-transport case study.

Authors:  Jamie Twycross; Leah R Band; Malcolm J Bennett; John R King; Natalio Krasnogor
Journal:  BMC Syst Biol       Date:  2010-03-26
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