Literature DB >> 18197199

Genome-wide association of major depression: description of samples for the GAIN Major Depressive Disorder Study: NTR and NESDA biobank projects.

Dorret I Boomsma1, Gonneke Willemsen, Patrick F Sullivan, Peter Heutink, Piet Meijer, David Sondervan, Cornelis Kluft, Guus Smit, Willem A Nolen, Frans G Zitman, Johannes H Smit, Witte J Hoogendijk, Richard van Dyck, Eco J C de Geus, Brenda W J H Penninx.   

Abstract

To identify the genomic regions that confer risk and protection for major depressive disorder (MDD) in humans, large-scale studies are needed. Such studies should collect multiple phenotypes, DNA, and ideally, biological material that allows gene expression analysis, transcriptomic, proteomic, and metabolomic studies. In this paper, we briefly review linkage studies of MDD and then describe the large-scale nationwide biological sample collection in Dutch twin families from the Netherlands Twin Register (NTR) and in participants in the Netherlands Study of Depression and Anxiety (NESDA). Within these studies, 1,862 participants with a diagnosis of MDD and 1,857 controls at low liability for MDD have been selected for genome-wide genotyping by the US Foundation for the National Institutes of Health Genetic Association Information Network. Stage 1 genome-wide association results are scheduled to be accessible before the end of 2007. Genome-wide association results are open-access and can be viewed at the dbGAP web portal (http://www.ncbi.nlm.nih.gov). Approved users can download the genotype and phenotype data, which have been made available as of 9 October 2007.

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Year:  2008        PMID: 18197199     DOI: 10.1038/sj.ejhg.5201979

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  85 in total

1.  Replication of association of 3p21.1 with susceptibility to bipolar disorder but not major depression.

Authors:  Gerome Breen; Cathryn M Lewis; Evangelos Vassos; Michele L Pergadia; Douglas H R Blackwood; Dorret I Boomsma; Brenda Penninx; Patrick F Sullivan; Inti Pedroso; David Collier; Peter McGuffin
Journal:  Nat Genet       Date:  2011-01       Impact factor: 38.330

2.  Genome-wide association study (GWAS)-identified disease risk alleles do not compromise human longevity.

Authors:  Marian Beekman; Christa Nederstigt; H Eka D Suchiman; Dennis Kremer; Ruud van der Breggen; Nico Lakenberg; Wendimagegn Ghidey Alemayehu; Anton J M de Craen; Rudi G J Westendorp; Dorret I Boomsma; Eco J C de Geus; Jeanine J Houwing-Duistermaat; Bastiaan T Heijmans; P Eline Slagboom
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

3.  Genome-wide association study of smoking initiation and current smoking.

Authors:  Jacqueline M Vink; August B Smit; Eco J C de Geus; Patrick Sullivan; Gonneke Willemsen; Jouke-Jan Hottenga; Johannes H Smit; Witte J Hoogendijk; Frans G Zitman; Leena Peltonen; Jaakko Kaprio; Nancy L Pedersen; Patrik K Magnusson; Tim D Spector; Kirsten Ohm Kyvik; Katherine I Morley; Andrew C Heath; Nicholas G Martin; Rudi G J Westendorp; P Eline Slagboom; Henning Tiemeier; Albert Hofman; Andre G Uitterlinden; Yurii S Aulchenko; Najaf Amin; Cornelia van Duijn; Brenda W Penninx; Dorret I Boomsma
Journal:  Am J Hum Genet       Date:  2009-03-05       Impact factor: 11.025

4.  Global similarity with local differences in linkage disequilibrium between the Dutch and HapMap-CEU populations.

Authors:  Luba Pardo; Zoltán Bochdanovits; Eco de Geus; Jouke J Hottenga; Patrick Sullivan; Danielle Posthuma; Brenda W J H Penninx; Dorret Boomsma; Peter Heutink
Journal:  Eur J Hum Genet       Date:  2009-01-07       Impact factor: 4.246

5.  Genome-wide pathway analysis in major depressive disorder.

Authors:  Gwan Gyu Song; Jae-Hoon Kim; Young Ho Lee
Journal:  J Mol Neurosci       Date:  2013-06-23       Impact factor: 3.444

6.  Inference of the genetic architecture underlying BMI and height with the use of 20,240 sibling pairs.

Authors:  Gibran Hemani; Jian Yang; Anna Vinkhuyzen; Joseph E Powell; Gonneke Willemsen; Jouke-Jan Hottenga; Abdel Abdellaoui; Massimo Mangino; Ana M Valdes; Sarah E Medland; Pamela A Madden; Andrew C Heath; Anjali K Henders; Dale R Nyholt; Eco J C de Geus; Patrik K E Magnusson; Erik Ingelsson; Grant W Montgomery; Timothy D Spector; Dorret I Boomsma; Nancy L Pedersen; Nicholas G Martin; Peter M Visscher
Journal:  Am J Hum Genet       Date:  2013-10-31       Impact factor: 11.025

7.  Rare ADH variant constellations are specific for alcohol dependence.

Authors:  Lingjun Zuo; Heping Zhang; Robert T Malison; Chiang-Shan R Li; Xiang-Yang Zhang; Fei Wang; Lingeng Lu; Lin Lu; Xiaoping Wang; John H Krystal; Fengyu Zhang; Hong-Wen Deng; Xingguang Luo
Journal:  Alcohol Alcohol       Date:  2012-09-27       Impact factor: 2.826

8.  Effectiveness of a web-based protocol for the screening and phenotyping of individuals with Tourette syndrome for genetic studies.

Authors:  Crystelle A Egan; Susan E Marakovitz; Julia A O'Rourke; Lisa Osiecki; Cornelia Illmann; Lauren Barton; Elizabeth McLaughlin; Rachel Proujansky; Justin Royal; Heather Cowley; Martha Rangel-Lugo; David L Pauls; Jeremiah M Scharf; Carol A Mathews
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2012-10-22       Impact factor: 3.568

9.  TMPRSS9 and GRIN2B are associated with neuroticism: a genome-wide association study in a European sample.

Authors:  Nagesh Aragam; Ke-Sheng Wang; James L Anderson; Xuefeng Liu
Journal:  J Mol Neurosci       Date:  2012-12-11       Impact factor: 3.444

10.  Quantifying between-cohort and between-sex genetic heterogeneity in major depressive disorder.

Authors:  Maciej Trzaskowski; Divya Mehta; Wouter J Peyrot; David Hawkes; Daniel Davies; David M Howard; Kathryn E Kemper; Julia Sidorenko; Robert Maier; Stephan Ripke; Manuel Mattheisen; Bernhard T Baune; Hans J Grabe; Andrew C Heath; Lisa Jones; Ian Jones; Pamela A F Madden; Andrew M McIntosh; Gerome Breen; Cathryn M Lewis; Anders D Børglum; Patrick F Sullivan; Nicholas G Martin; Kenneth S Kendler; Douglas F Levinson; Naomi R Wray
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2019-02-01       Impact factor: 3.568

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