Literature DB >> 18193257

First steps towards systems radiation biology studies concerned with DNA and chromosome structure within living cells.

Werner Friedland1, Herwig G Paretzke, Francesca Ballarini, Andrea Ottolenghi, Gregor Kreth, Christoph Cremer.   

Abstract

For the understanding of radiation action on biological systems like cellular macromolecules (e.g., DNA in its higher structures) a synergistic approach of experiments and quantitative modelling of working hypotheses is necessary. Further on, the influence on calculated results of certain assumptions in such working hypotheses must critically be evaluated. In the present work, this issue is highlighted in two aspects for the case of DNA damage in single cells. First, yields of double-strand breaks and frequency distributions of DNA fragment lengths after ion irradiation were calculated using different assumptions on the DNA target model. Compared to a former target model now a moderate effect due to the inclusion of a spherical chromatin domain model has been found. Second, the influence of assumptions on particular geometric chromosome models on calculated chromosome aberration data is illustrated with two target-modelling approaches for this end point.

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Year:  2008        PMID: 18193257     DOI: 10.1007/s00411-007-0152-x

Source DB:  PubMed          Journal:  Radiat Environ Biophys        ISSN: 0301-634X            Impact factor:   1.925


  28 in total

1.  Stochastic aspects and uncertainties in the prechemical and chemical stages of electron tracks in liquid water: a quantitative analysis based on Monte Carlo simulations.

Authors:  F Ballarini; M Biaggi; M Merzagora; A Ottolenghi; M Dingfelder; W Friedland; P Jacob; H G Paretzke
Journal:  Radiat Environ Biophys       Date:  2000-09       Impact factor: 1.925

2.  The relationship between chromosome aberrations and low LET radiation dose to human lymphocytes.

Authors:  D C Lloyd; R J Purrott; G W Dolphin; D Bolton; A A Edwards; M J Corp
Journal:  Int J Radiat Biol Relat Stud Phys Chem Med       Date:  1975-07

3.  Induction and rejoining of DNA double-strand breaks in normal human skin fibroblasts after exposure to radiation of different linear energy transfer: possible roles of track structure and chromatin organization.

Authors:  H Höglund; B Stenerlöw
Journal:  Radiat Res       Date:  2001-06       Impact factor: 2.841

4.  Models of chromosome aberration induction: an example based on radiation track structure.

Authors:  F Ballarini; A Ottolenghi
Journal:  Cytogenet Genome Res       Date:  2004       Impact factor: 1.636

5.  A model of chromosome aberration induction: applications to space research.

Authors:  Francesca Ballarini; Andrea Ottolenghi
Journal:  Radiat Res       Date:  2005-10       Impact factor: 2.841

6.  Comparison of gamma-ray induced dicentric yields in human lymphocytes measured by conventional analysis and FISH.

Authors:  E Schmid; H Braselmann; U Nahrstedt
Journal:  Mutat Res       Date:  1995-11       Impact factor: 2.433

7.  The induction of chromosome aberrations in human lymphocytes by in vitro irradiation with alpha-particles from plutonium-239.

Authors:  R J Purrott; A A Edwards; D C Lloyd; J W Stather
Journal:  Int J Radiat Biol Relat Stud Phys Chem Med       Date:  1980-09

8.  The use of chromosomal aberrations in human lymphocytes for biological dosimetry.

Authors:  A A Edwards
Journal:  Radiat Res       Date:  1997-11       Impact factor: 2.841

9.  Clusters of DNA damage induced by ionizing radiation: formation of short DNA fragments. II. Experimental detection.

Authors:  B Rydberg
Journal:  Radiat Res       Date:  1996-02       Impact factor: 2.841

10.  Chromatin conformation in living cells: support for a zig-zag model of the 30 nm chromatin fiber.

Authors:  B Rydberg; W R Holley; I S Mian; A Chatterjee
Journal:  J Mol Biol       Date:  1998-11-20       Impact factor: 5.469

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  18 in total

1.  The first international workshop on systems radiation biology: a new approach to solve old questions.

Authors:  Herwig G Paretzke
Journal:  Radiat Environ Biophys       Date:  2008-02       Impact factor: 1.925

2.  Live cell microscopy analysis of radiation-induced DNA double-strand break motion.

Authors:  B Jakob; J Splinter; M Durante; G Taucher-Scholz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-12       Impact factor: 11.205

3.  Time- and space-resolved Monte Carlo study of water radiolysis for photon, electron and ion irradiation.

Authors:  Maximilian S Kreipl; Werner Friedland; Herwig G Paretzke
Journal:  Radiat Environ Biophys       Date:  2008-10-24       Impact factor: 1.925

4.  Interaction of ion tracks in spatial and temporal proximity.

Authors:  Maximilian Stephan Kreipl; Werner Friedland; Herwig G Paretzke
Journal:  Radiat Environ Biophys       Date:  2009-07-12       Impact factor: 1.925

5.  Cellular Response to Proton Irradiation: A Simulation Study with TOPAS-nBio.

Authors:  Hongyu Zhu; Aimee L McNamara; Stephen J McMahon; Jose Ramos-Mendez; Nicholas T Henthorn; Bruce Faddegon; Kathryn D Held; Joseph Perl; Junli Li; Harald Paganetti; Jan Schuemann
Journal:  Radiat Res       Date:  2020-07-08       Impact factor: 2.841

Review 6.  Internal microdosimetry of alpha-emitting radionuclides.

Authors:  Werner Hofmann; Wei Bo Li; Werner Friedland; Brian W Miller; Balázs Madas; Manuel Bardiès; Imre Balásházy
Journal:  Radiat Environ Biophys       Date:  2019-12-21       Impact factor: 1.925

7.  Mixed secondary chromatin structure revealed by modeling radiation-induced DNA fragment length distribution.

Authors:  Wenzong Ma; Chenyang Gu; Lin Ma; Caoqi Fan; Chao Zhang; Yujie Sun; Cheng Li; Gen Yang
Journal:  Sci China Life Sci       Date:  2020-04-02       Impact factor: 6.038

8.  Multi-scaled Monte Carlo calculation for radon-induced cellular damage in the bronchial airway epithelium.

Authors:  Ali Abu Shqair; Eun-Hee Kim
Journal:  Sci Rep       Date:  2021-05-13       Impact factor: 4.379

9.  An Expanded Multi-scale Monte Carlo Simulation Method for Personalized Radiobiological Effect Estimation in Radiotherapy: a feasibility study.

Authors:  Ying Zhang; Yuanming Feng; Wei Wang; Chengwen Yang; Ping Wang
Journal:  Sci Rep       Date:  2017-03-21       Impact factor: 4.379

10.  Comprehensive track-structure based evaluation of DNA damage by light ions from radiotherapy-relevant energies down to stopping.

Authors:  W Friedland; E Schmitt; P Kundrát; M Dingfelder; G Baiocco; S Barbieri; A Ottolenghi
Journal:  Sci Rep       Date:  2017-03-27       Impact factor: 4.379

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