Literature DB >> 18184575

Contributions to the NIH-NIGMS Protein Structure Initiative from the PSI Production Centers.

Stephen K Burley1, Andrzej Joachimiak, Gaetano T Montelione, Ian A Wilson.   

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Year:  2008        PMID： 18184575      PMCID： PMC2678832          DOI： 10.1016/j.str.2007.12.002

Source DB:  PubMed          Journal:  Structure        ISSN： 0969-2126            Impact factor:   5.006


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  21 in total

1.  Rapid refinement of crystallographic protein construct definition employing enhanced hydrogen/deuterium exchange MS.

Authors:  Dennis Pantazatos; Jack S Kim; Heath E Klock; Raymond C Stevens; Ian A Wilson; Scott A Lesley; Virgil L Woods
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-08       Impact factor: 11.205

2.  Crystal structure of thy1, a thymidylate synthase complementing protein from Thermotoga maritima at 2.25 A resolution.

Authors:  Peter Kuhn; Scott A Lesley; Irimpan I Mathews; Jaume M Canaves; Linda S Brinen; Xiaoping Dai; Ashley M Deacon; Marc A Elsliger; Said Eshaghi; Ross Floyd; Adam Godzik; Carina Grittini; Slawomir K Grzechnik; Chittibabu Guda; Keith O Hodgson; Lukasz Jaroszewski; Cathy Karlak; Heath E Klock; Eric Koesema; John M Kovarik; Andreas T Kreusch; Daniel McMullan; Timothy M McPhillips; Mark A Miller; Mitchell Miller; Andrew Morse; Kin Moy; Jie Ouyang; Alyssa Robb; Kevin Rodrigues; Thomas L Selby; Glen Spraggon; Raymond C Stevens; Susan S Taylor; Henry van den Bedem; Jeff Velasquez; Juli Vincent; Xianhong Wang; Bill West; Guenter Wolf; John Wooley; Ian A Wilson
Journal:  Proteins       Date:  2002-10-01

3.  High-throughput limited proteolysis/mass spectrometry for protein domain elucidation.

Authors:  Xia Gao; Kevin Bain; Jeffery B Bonanno; Michelle Buchanan; Davin Henderson; Don Lorimer; Curtis Marsh; Julie A Reynes; J Michael Sauder; Ken Schwinn; Chau Thai; Stephen K Burley
Journal:  J Struct Funct Genomics       Date:  2005

4.  HKL-3000: the integration of data reduction and structure solution--from diffraction images to an initial model in minutes.

Authors:  Wladek Minor; Marcin Cymborowski; Zbyszek Otwinowski; Maksymilian Chruszcz
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-07-18

Review 5.  The impact of structural genomics: expectations and outcomes.

Authors:  John-Marc Chandonia; Steven E Brenner
Journal:  Science       Date:  2006-01-20       Impact factor: 47.728

6.  Growth of novel protein structural data.

Authors:  Michael Levitt
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-20       Impact factor: 11.205

7.  A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus.

Authors:  Joseph D Mougous; Marianne E Cuff; Stefan Raunser; Aimee Shen; Min Zhou; Casey A Gifford; Andrew L Goodman; Grazyna Joachimiak; Claudia L Ordoñez; Stephen Lory; Thomas Walz; Andrzej Joachimiak; John J Mekalanos
Journal:  Science       Date:  2006-06-09       Impact factor: 47.728

8.  NMR data collection and analysis protocol for high-throughput protein structure determination.

Authors:  Gaohua Liu; Yang Shen; Hanudatta S Atreya; David Parish; Ying Shao; Dinesh K Sukumaran; Rong Xiao; Adelinda Yee; Alexander Lemak; Aneerban Bhattacharya; Thomas A Acton; Cheryl H Arrowsmith; Gaetano T Montelione; Thomas Szyperski
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-18       Impact factor: 11.205

9.  Protein production by auto-induction in high density shaking cultures.

Authors:  F William Studier
Journal:  Protein Expr Purif       Date:  2005-05       Impact factor: 1.650

10.  An expression vector tailored for large-scale, high-throughput purification of recombinant proteins.

Authors:  Mark I Donnelly; Min Zhou; Cynthia Sanville Millard; Shonda Clancy; Lucy Stols; William H Eschenfeldt; Frank R Collart; Andrzej Joachimiak
Journal:  Protein Expr Purif       Date:  2006-01-30       Impact factor: 1.650
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  37 in total

Review 1.  A community resource of experimental data for NMR / X-ray crystal structure pairs.

Authors:  John K Everett; Roberto Tejero; Sarath B K Murthy; Thomas B Acton; James M Aramini; Michael C Baran; Jordi Benach; John R Cort; Alexander Eletsky; Farhad Forouhar; Rongjin Guan; Alexandre P Kuzin; Hsiau-Wei Lee; Gaohua Liu; Rajeswari Mani; Binchen Mao; Jeffrey L Mills; Alexander F Montelione; Kari Pederson; Robert Powers; Theresa Ramelot; Paolo Rossi; Jayaraman Seetharaman; David Snyder; G V T Swapna; Sergey M Vorobiev; Yibing Wu; Rong Xiao; Yunhuang Yang; Cheryl H Arrowsmith; John F Hunt; Michael A Kennedy; James H Prestegard; Thomas Szyperski; Liang Tong; Gaetano T Montelione
Journal:  Protein Sci       Date:  2015-09-22       Impact factor: 6.725

2.  Future structural genomics initiatives: an interview with Helen Berman, director of the Protein Data Bank. Interview by Wendy A Warr.

Authors:  Helen M Berman
Journal:  J Comput Aided Mol Des       Date:  2008-09-10       Impact factor: 3.686

3.  Internal organization of large protein families: relationship between the sequence, structure, and function-based clustering.

Authors:  Xiao-Hui Cai; Lukasz Jaroszewski; John Wooley; Adam Godzik
Journal:  Proteins       Date:  2011-05-31

Review 4.  High-throughput protein purification and quality assessment for crystallization.

Authors:  Youngchang Kim; Gyorgy Babnigg; Robert Jedrzejczak; William H Eschenfeldt; Hui Li; Natalia Maltseva; Catherine Hatzos-Skintges; Minyi Gu; Magdalena Makowska-Grzyska; Ruiying Wu; Hao An; Gekleng Chhor; Andrzej Joachimiak
Journal:  Methods       Date:  2011-08-31       Impact factor: 3.608

Review 5.  Advances in protein NMR provided by the NIGMS Protein Structure Initiative: impact on drug discovery.

Authors:  Gaetano T Montelione; Thomas Szyperski
Journal:  Curr Opin Drug Discov Devel       Date:  2010-05

Review 6.  Coverage of protein domain families with structural protein-protein interactions: current progress and future trends.

Authors:  Alexander Goncearenco; Benjamin A Shoemaker; Dachuan Zhang; Alexey Sarychev; Anna R Panchenko
Journal:  Prog Biophys Mol Biol       Date:  2014-06-13       Impact factor: 3.667

7.  Predicting small ligand binding sites in proteins using backbone structure.

Authors:  Andrew J Bordner
Journal:  Bioinformatics       Date:  2008-10-21       Impact factor: 6.937

8.  Unique opportunities for NMR methods in structural genomics.

Authors:  Gaetano T Montelione; Cheryl Arrowsmith; Mark E Girvin; Michael A Kennedy; John L Markley; Robert Powers; James H Prestegard; Thomas Szyperski
Journal:  J Struct Funct Genomics       Date:  2009-03-15

9.  Protein secondary structure appears to be robust under in silico evolution while protein disorder appears not to be.

Authors:  Christian Schaefer; Avner Schlessinger; Burkhard Rost
Journal:  Bioinformatics       Date:  2010-01-16       Impact factor: 6.937

10.  Autoindexing the diffraction patterns from crystals with a pseudotranslation.

Authors:  Nicholas K Sauter; Peter H Zwart
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-05-15
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