Literature DB >> 18155936

Solid state 19F NMR parameters of fluorine-labeled amino acids. Part I: aromatic substituents.

Ulrich H N Dürr1, Stephan L Grage, Raiker Witter, Anne S Ulrich.   

Abstract

Structural parameters of peptides and proteins in biomembranes can be directly measured by solid state NMR of selectively labeled amino acids. The 19F nucleus is a promising label to overcome the low sensitivity of 2H, 13C or 15N, and to serve as a background-free reporter group in biological compounds. To make the advantages of solid state 19F NMR fully available for structural studies of polypeptides, we have systematically measured the chemical shift anisotropies and relaxation properties of the most relevant aromatic and aliphatic 19F-labeled amino acids. In this first part of two consecutive contributions, six different 19F-substituents on representative aromatic side chains were characterized as polycrystalline powders by static and MAS experiments. The data are also compared with results on the same amino acids incorporated in synthetic peptides. The spectra show a wide variety of lineshapes, from which the principal values of the CSA tensors were extracted. In addition, temperature-dependent T(1) and T(2) relaxation times were determined by 19F NMR in the solid state, and isotropic chemical shifts and scalar couplings were obtained in solution.

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Year:  2007        PMID: 18155936     DOI: 10.1016/j.jmr.2007.11.017

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  16 in total

1.  2-Fluorotyrosine is a valuable but understudied amino acid for protein-observed 19F NMR.

Authors:  Peter D Ycas; Nicole Wagner; Noelle M Olsen; Riqiang Fu; William C K Pomerantz
Journal:  J Biomol NMR       Date:  2019-11-23       Impact factor: 2.835

2.  Determination of Long-Range Distances by Fast Magic-Angle-Spinning Radiofrequency-Driven 19F-19F Dipolar Recoupling NMR.

Authors:  Matthias Roos; Venkata S Mandala; Mei Hong
Journal:  J Phys Chem B       Date:  2018-09-27       Impact factor: 2.991

3.  Oriented samples: a tool for determining the membrane topology and the mechanism of action of cationic antimicrobial peptides by solid-state NMR.

Authors:  Matthieu Fillion; Michèle Auger
Journal:  Biophys Rev       Date:  2015-02-24

4.  3D hydrophobic moment vectors as a tool to characterize the surface polarity of amphiphilic peptides.

Authors:  Sabine Reißer; Erik Strandberg; Thomas Steinbrecher; Anne S Ulrich
Journal:  Biophys J       Date:  2014-06-03       Impact factor: 4.033

5.  Synthesis of Intrinsically Disordered Fluorinated Peptides for Modular Design of High-Signal 19 F MRI Agents.

Authors:  Steven E Kirberger; Sofia D Maltseva; Joseph C Manulik; Samuel A Einstein; Bradley P Weegman; Michael Garwood; William C K Pomerantz
Journal:  Angew Chem Int Ed Engl       Date:  2017-05-04       Impact factor: 15.336

6.  Rapid measurement of long-range distances in proteins by multidimensional 13C-19F REDOR NMR under fast magic-angle spinning.

Authors:  Alexander A Shcherbakov; Mei Hong
Journal:  J Biomol NMR       Date:  2018-05-21       Impact factor: 2.835

7.  Elucidating Relayed Proton Transfer through a His-Trp-His Triad of a Transmembrane Proton Channel by Solid-State NMR.

Authors:  Byungsu Kwon; Matthias Roos; Venkata S Mandala; Alexander A Shcherbakov; Mei Hong
Journal:  J Mol Biol       Date:  2019-05-11       Impact factor: 5.469

8.  Site-specific ¹⁹F NMR chemical shift and side chain relaxation analysis of a membrane protein labeled with an unnatural amino acid.

Authors:  Pan Shi; Hu Wang; Zhaoyong Xi; Chaowei Shi; Ying Xiong; Changlin Tian
Journal:  Protein Sci       Date:  2011-01       Impact factor: 6.725

9.  19F Magic Angle Spinning NMR Spectroscopy and Density Functional Theory Calculations of Fluorosubstituted Tryptophans: Integrating Experiment and Theory for Accurate Determination of Chemical Shift Tensors.

Authors:  Manman Lu; Sucharita Sarkar; Mingzhang Wang; Jodi Kraus; Matthew Fritz; Caitlin M Quinn; Shi Bai; Sean T Holmes; Cecil Dybowski; Glenn P A Yap; Jochem Struppe; Ivan V Sergeyev; Werner Maas; Angela M Gronenborn; Tatyana Polenova
Journal:  J Phys Chem B       Date:  2018-05-30       Impact factor: 2.991

10.  The precious fluorine on the ring: fluorine NMR for biological systems.

Authors:  Andras Boeszoermenyi; Barbara Ogórek; Akshay Jain; Haribabu Arthanari; Gerhard Wagner
Journal:  J Biomol NMR       Date:  2020-07-10       Impact factor: 2.835

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