Literature DB >> 18086576

RNA editing in regulating gene expression in the brain.

James E C Jepson1, Robert A Reenan.   

Abstract

Adenosine to inosine RNA editing, catalyzed by Adenosine Deaminases Acting on RNA (ADARs), represents an evolutionary conserved post-transcriptional mechanism which harnesses RNA structures to produce proteins that are not literally encoded in the genome. The species-specific alteration of functionally important residues in a multitude of neuronal ion channels and pre-synaptic proteins through RNA editing has been shown to have profound importance for normal nervous system function in a wide range of invertebrate and vertebrate model organisms. ADARs have also been shown to regulate neuronal gene expression through a remarkable variety of disparate processes, including modulation of the RNAi pathway, the creation of alternative splice sites, and the abolition of stop codons. In addition, ADARs have recently been revealed to have a novel role in the primate lineage: the widespread editing of Alu elements, which comprise approximately 10% of the human genome. Thus, as well as enabling the cell-specific regulation of RNAi and selfish genetic elements, the unshackling of the proteome from the constraints of the genome through RNA editing may have been fundamental to the evolution of complex behavior.

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Year:  2007        PMID: 18086576     DOI: 10.1016/j.bbagrm.2007.11.009

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  58 in total

1.  Making sense out of nonsense to visualize editing in the fly nervous system.

Authors:  Chammiran Daniel; Marie Ohman
Journal:  Nat Methods       Date:  2012-01-30       Impact factor: 28.547

Review 2.  When you can't trust the DNA: RNA editing changes transcript sequences.

Authors:  Volker Knoop
Journal:  Cell Mol Life Sci       Date:  2010-10-12       Impact factor: 9.261

3.  Adenosine-to-inosine RNA editing affects trafficking of the gamma-aminobutyric acid type A (GABA(A)) receptor.

Authors:  Chammiran Daniel; Helene Wahlstedt; Johan Ohlson; Petra Björk; Marie Ohman
Journal:  J Biol Chem       Date:  2010-10-28       Impact factor: 5.157

Review 4.  Epigenetic principles and mechanisms underlying nervous system functions in health and disease.

Authors:  Mark F Mehler
Journal:  Prog Neurobiol       Date:  2008-10-17       Impact factor: 11.685

5.  Antagonistic and stimulative roles of ADAR1 in RNA silencing.

Authors:  Kazuko Nishikura; Masayuki Sakurai; Kantaro Ariyoshi; Hiromitsu Ota
Journal:  RNA Biol       Date:  2013-07-30       Impact factor: 4.652

6.  Quantification of adenosine-to-inosine editing of microRNAs using a conventional method.

Authors:  Yukio Kawahara
Journal:  Nat Protoc       Date:  2012-06-28       Impact factor: 13.491

7.  A-to-I RNA editing alters less-conserved residues of highly conserved coding regions: implications for dual functions in evolution.

Authors:  Yun Yang; Jianning Lv; Bin Gui; Heng Yin; Xiaojie Wu; Yaozhou Zhang; Yongfeng Jin
Journal:  RNA       Date:  2008-06-20       Impact factor: 4.942

Review 8.  Parallel Evolution and Lineage-Specific Expansion of RNA Editing in Ctenophores.

Authors:  Andrea B Kohn; Rachel S Sanford; Masa-aki Yoshida; Leonid L Moroz
Journal:  Integr Comp Biol       Date:  2015-06-18       Impact factor: 3.326

9.  Transcriptome-wide identification of A > I RNA editing sites by inosine specific cleavage.

Authors:  Pierre B Cattenoz; Ryan J Taft; Eric Westhof; John S Mattick
Journal:  RNA       Date:  2012-12-21       Impact factor: 4.942

10.  Dynamic regulation of RNA editing in human brain development and disease.

Authors:  Taeyoung Hwang; Chul-Kee Park; Anthony K L Leung; Yuan Gao; Thomas M Hyde; Joel E Kleinman; Anandita Rajpurohit; Ran Tao; Joo Heon Shin; Daniel R Weinberger
Journal:  Nat Neurosci       Date:  2016-06-27       Impact factor: 24.884

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