Literature DB >> 18073443

Genomic instability within centromeres of interspecific marsupial hybrids.

Cushla J Metcalfe1, Kira V Bulazel, Gianni C Ferreri, Elizabeth Schroeder-Reiter, Gerhard Wanner, Willem Rens, Craig Obergfell, Mark D B Eldridge, Rachel J O'Neill.   

Abstract

Several lines of evidence suggest that, within a lineage, particular genomic regions are subject to instability that can lead to specific types of chromosome rearrangements important in species incompatibility. Within family Macropodidae (kangaroos, wallabies, bettongs, and potoroos), which exhibit recent and extensive karyotypic evolution, rearrangements involve chiefly the centromere. We propose that centromeres are the primary target for destabilization in cases of genomic instability, such as interspecific hybridization, and participate in the formation of novel chromosome rearrangements. Here we use standard cytological staining, cross-species chromosome painting, DNA probe analyses, and scanning electron microscopy to examine four interspecific macropodid hybrids (Macropus rufogriseus x Macropus agilis). The parental complements share the same centric fusions relative to the presumed macropodid ancestral karyotype, but can be differentiated on the basis of heterochromatic content, M. rufogriseus having larger centromeres with large C-banding positive regions. All hybrids exhibited the same pattern of chromosomal instability and remodeling specifically within the centromeres derived from the maternal (M. rufogriseus) complement. This instability included amplification of a satellite repeat and a transposable element, changes in chromatin structure, and de novo whole-arm rearrangements. We discuss possible reasons and mechanisms for the centromeric instability and remodeling observed in all four macropodid hybrids.

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Year:  2007        PMID: 18073443      PMCID: PMC2219476          DOI: 10.1534/genetics.107.082313

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  51 in total

1.  A tandemly repeated DNA sequence is associated with both knob-like heterochromatin and a highly decondensed structure in the meiotic pachytene chromosomes of rice.

Authors:  Z Cheng; R M Stupar; M Gu; J Jiang
Journal:  Chromosoma       Date:  2001-04       Impact factor: 4.316

Review 2.  Conflict begets complexity: the evolution of centromeres.

Authors:  Harmit S Malik; Steven Henikoff
Journal:  Curr Opin Genet Dev       Date:  2002-12       Impact factor: 5.578

Review 3.  The role of RNA interference in heterochromatic silencing.

Authors:  Zachary Lippman; Rob Martienssen
Journal:  Nature       Date:  2004-09-16       Impact factor: 49.962

4.  Genome expansion in three hybrid sunflower species is associated with retrotransposon proliferation.

Authors:  Mark C Ungerer; Suzanne C Strakosh; Ying Zhen
Journal:  Curr Biol       Date:  2006-10-24       Impact factor: 10.834

5.  Adaptive evolution of Cid, a centromere-specific histone in Drosophila.

Authors:  H S Malik; S Henikoff
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

Review 6.  Radiation of chromosome shuffles.

Authors:  M D Eldridge; R L Close
Journal:  Curr Opin Genet Dev       Date:  1993-12       Impact factor: 5.578

7.  Efficient preparation of plant chromosomes for high-resolution scanning electron microscopy.

Authors:  R Martin; W Busch; R G Herrmann; G Wanner
Journal:  Chromosome Res       Date:  1994-09       Impact factor: 5.239

8.  A knob-associated tandem repeat in maize capable of forming fold-back DNA segments: are chromosome knobs megatransposons?

Authors:  E V Ananiev; R L Phillips; H W Rines
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

9.  A centromere-specific retroviral element associated with breaks of synteny in macropodine marsupials.

Authors:  G C Ferreri; M Marzelli; W Rens; R J O'Neill
Journal:  Cytogenet Genome Res       Date:  2004       Impact factor: 1.636

10.  Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila.

Authors:  Julius Brennecke; Alexei A Aravin; Alexander Stark; Monica Dus; Manolis Kellis; Ravi Sachidanandam; Gregory J Hannon
Journal:  Cell       Date:  2007-03-08       Impact factor: 41.582

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  43 in total

Review 1.  What makes transposable elements move in the Drosophila genome?

Authors:  M P García Guerreiro
Journal:  Heredity (Edinb)       Date:  2011-10-05       Impact factor: 3.821

Review 2.  Evolutionary impact of transposable elements on genomic diversity and lineage-specific innovation in vertebrates.

Authors:  Ian A Warren; Magali Naville; Domitille Chalopin; Perrine Levin; Chloé Suzanne Berger; Delphine Galiana; Jean-Nicolas Volff
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

3.  The ultrastructure of mono- and holocentric plant centromeres: an immunological investigation by structured illumination microscopy and scanning electron microscopy.

Authors:  Gerhard Wanner; Elizabeth Schroeder-Reiter; Wei Ma; Andreas Houben; Veit Schubert
Journal:  Chromosoma       Date:  2015-06-06       Impact factor: 4.316

4.  Evolution of the structure and composition of house mouse satellite DNA sequences in the subgenus Mus (Rodentia: Muridea): a cytogenomic approach.

Authors:  B Cazaux; J Catalan; F Justy; C Escudé; E Desmarais; J Britton-Davidian
Journal:  Chromosoma       Date:  2013-03-21       Impact factor: 4.316

5.  Hypermorphic expression of centromeric retroelement-encoded small RNAs impairs CENP-A loading.

Authors:  Dawn M Carone; Chu Zhang; Laura E Hall; Craig Obergfell; Benjamin R Carone; Michael J O'Neill; Rachel J O'Neill
Journal:  Chromosome Res       Date:  2013-02-08       Impact factor: 5.239

6.  Haldane's rule in marsupials: what happens when both sexes are functionally hemizygous?

Authors:  Eric T Watson; Jeffery P Demuth
Journal:  J Hered       Date:  2012-02-29       Impact factor: 2.645

Review 7.  Biological action in Read-Write genome evolution.

Authors:  James A Shapiro
Journal:  Interface Focus       Date:  2017-08-18       Impact factor: 3.906

8.  Mobile DNA and evolution in the 21st century.

Authors:  James A Shapiro
Journal:  Mob DNA       Date:  2010-01-25

9.  Centromere scission drives chromosome shuffling and reproductive isolation.

Authors:  Vikas Yadav; Sheng Sun; Marco A Coelho; Joseph Heitman
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-19       Impact factor: 11.205

10.  Distinct retroelement classes define evolutionary breakpoints demarcating sites of evolutionary novelty.

Authors:  Mark S Longo; Dawn M Carone; Eric D Green; Michael J O'Neill; Rachel J O'Neill
Journal:  BMC Genomics       Date:  2009-07-24       Impact factor: 3.969

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