Literature DB >> 18061479

Electron tomography of vitreous sections from cultured mammalian cells.

Manuela Gruska1, Ohad Medalia, Wolfgang Baumeister, Andrew Leis.   

Abstract

Cryo-electron tomography of appropriately thin, frozen-hydrated biological specimens has excellent potential for investigating the 3D macromolecular architecture of eukaryotic cells and tissues. Since cardiomyocytes are too thick to be visualised in an intact state, we grew immortalised cell line HL-1 to sub-confluency and harvested the cells by enzymatic detachment prior to hyperbaric freezing, ultramicrotomy, and tomography. We improved the efficiency of tomographic acquisition from vitreous cryosections by implementing two new features: (1) fluorescence microscopy at cryogenic temperatures to search for features of interest without expending any of the tolerable electron dose on secondary (non-imaging) tasks, and (2) the use of colloidal gold as fiducial markers. Vital fluorescent staining and subsequent cryo-fluorescence microscopy of vitreous sections were used to localise mitochondria lying in positions suitable for acquiring tilt series, taking into account section flatness, presence of contamination and proximity to grid bars. To provide a simple and robust means of aligning tomograms, we developed a universally applicable protocol for depositing colloidal gold onto vitreous sections, analogous to the method for applying quantum dots described by Masich et al. [Masich, S., Ostberg, T., Norlén, L., Shupliakov, O., Daneholt, B., 2006. A procedure to deposit fiducial markers on vitreous cryo-sections for cellular tomography. J. Struct. Biol. 156, 461-468]. Tomograms of thin sections (nominal thickness 65-85 nm) of cardiac mitochondria revealed the interconnectivity of cristae and junctions with the inner mitochondrial membrane. In some cases, ATP synthases could be identified without ambiguity. These findings confirm the feasibility of investigating the structural biology of mammalian cells in three dimensions and at a resolution of 6-8 nm.

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Year:  2007        PMID: 18061479     DOI: 10.1016/j.jsb.2007.10.008

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  27 in total

Review 1.  Retrospective on the early development of cryoelectron microscopy of macromolecules and a prospective on opportunities for the future.

Authors:  Kenneth A Taylor; Robert M Glaeser
Journal:  J Struct Biol       Date:  2008-06-19       Impact factor: 2.867

2.  Correlative microscopy for 3D structural analysis of dynamic interactions.

Authors:  Sangmi Jun; Gongpu Zhao; Jiying Ning; Gregory A Gibson; Simon C Watkins; Peijun Zhang
Journal:  J Vis Exp       Date:  2013-06-24       Impact factor: 1.355

3.  Structural organization of Weibel-Palade bodies revealed by cryo-EM of vitrified endothelial cells.

Authors:  John A Berriman; Sam Li; Lindsay J Hewlett; Sebastian Wasilewski; Fedir N Kiskin; Tom Carter; Matthew J Hannah; Peter B Rosenthal
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-29       Impact factor: 11.205

Review 4.  Advances in Cryo-Correlative Light and Electron Microscopy: Applications for Studying Molecular and Cellular Events.

Authors:  Sangmi Jun; Hyun-Joo Ro; Anahita Bharda; Seung Il Kim; Dooil Jeoung; Hyun Suk Jung
Journal:  Protein J       Date:  2019-12       Impact factor: 2.371

Review 5.  Advances in tomography: probing the molecular architecture of cells.

Authors:  Karen Fridman; Asaf Mader; Monika Zwerger; Natalie Elia; Ohad Medalia
Journal:  Nat Rev Mol Cell Biol       Date:  2012-10-10       Impact factor: 94.444

6.  Chromatin organization and radio resistance in the bacterium Gemmata obscuriglobus.

Authors:  Arnon Lieber; Andrew Leis; Ariel Kushmaro; Abraham Minsky; Ohad Medalia
Journal:  J Bacteriol       Date:  2008-12-12       Impact factor: 3.490

7.  Correlative microscopy methods that maximize specimen fidelity and data completeness, and improve molecular localization capabilities.

Authors:  Elizabeth A Smith; Bertrand P Cinquin; Gerry McDermott; Mark A Le Gros; Dilworth Y Parkinson; Hong Tae Kim; Carolyn A Larabell
Journal:  J Struct Biol       Date:  2013-03-24       Impact factor: 2.867

Review 8.  Probing the macromolecular organization of cells by electron tomography.

Authors:  Andreas Hoenger; J Richard McIntosh
Journal:  Curr Opin Cell Biol       Date:  2009-02       Impact factor: 8.382

9.  From dynamic live cell imaging to 3D ultrastructure: novel integrated methods for high pressure freezing and correlative light-electron microscopy.

Authors:  Coralie Spiegelhalter; Valérie Tosch; Didier Hentsch; Marc Koch; Pascal Kessler; Yannick Schwab; Jocelyn Laporte
Journal:  PLoS One       Date:  2010-02-03       Impact factor: 3.240

10.  Direct observation of molecular arrays in the organized smooth endoplasmic reticulum.

Authors:  Vladimir M Korkhov; Benoît Zuber
Journal:  BMC Cell Biol       Date:  2009-08-24       Impact factor: 4.241

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