Literature DB >> 18044971

Dioxygen activation at non-heme diiron centers: oxidation of a proximal residue in the I100W variant of toluene/o-xylene monooxygenase hydroxylase.

Leslie J Murray1, Ricardo García-Serres, Michael S McCormick, Roman Davydov, Sunil G Naik, Sun-Hee Kim, Brian M Hoffman, Boi Hanh Huynh, Stephen J Lippard.   

Abstract

At its carboxylate-bridged diiron active site, the hydroxylase component of toluene/o-xylene monooxygenase activates dioxygen for subsequent arene hydroxylation. In an I100W variant of this enzyme, we characterized the formation and decay of two species formed by addition of dioxygen to the reduced, diiron(II) state by rapid-freeze quench (RFQ) EPR, Mössbauer, and ENDOR spectroscopy. The dependence of the formation and decay rates of this mixed-valent transient on pH and the presence of phenol, propylene, or acetylene was investigated by double-mixing stopped-flow optical spectroscopy. Modification of the alpha-subunit of the hydroxylase after reaction of the reduced protein with dioxygen-saturated buffer was investigated by tryptic digestion coupled mass spectrometry. From these investigations, we conclude that (i) a diiron(III,IV)-W* transient, kinetically linked to a preceding diiron(III) intermediate, arises from the one-electron oxidation of W100, (ii) the tryptophan radical is deprotonated, (iii) rapid exchange of either a terminal water or hydroxide ion with water occurs at the ferric ion in the diiron(III,IV) cluster, and (iv) the diiron(III,IV) core and W* decay to the diiron(III) product by a common mechanism. No transient radical was observed by stopped-flow optical spectroscopy for reactions of the reduced hydroxylase variants I100Y, L208F, and F205W with dioxygen. The absence of such species, and the deprotonated state of the tryptophanyl radical in the diiron(III,IV)-W* transient, allow for a conservative estimate of the reduction potential of the diiron(III) intermediate as lying between 1.1 and 1.3 V. We also describe the X-ray crystal structure of the I100W variant of ToMOH.

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Year:  2007        PMID: 18044971      PMCID: PMC2494530          DOI: 10.1021/bi7017128

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  54 in total

Review 1.  Databases in protein crystallography.

Authors:  G J Kleywegt; T A Jones
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-11-01

2.  X-ray crystal structure of alcohol products bound at the active site of soluble methane monooxygenase hydroxylase.

Authors:  D A Whittington; M H Sazinsky; S J Lippard
Journal:  J Am Chem Soc       Date:  2001-02-28       Impact factor: 15.419

3.  Threonine 201 in the diiron enzyme toluene 4-monooxygenase is not required for catalysis.

Authors:  J D Pikus; K H Mitchell; J M Studts; K McClay; R J Steffan; B G Fox
Journal:  Biochemistry       Date:  2000-02-01       Impact factor: 3.162

4.  Dioxygen activation at non-heme diiron centers: characterization of intermediates in a mutant form of toluene/o-xylene monooxygenase hydroxylase.

Authors:  Leslie J Murray; Ricardo García-Serres; Sunil Naik; Boi Hanh Huynh; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2006-06-14       Impact factor: 15.419

5.  Crystal structures of the methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath): implications for substrate gating and component interactions.

Authors:  A C Rosenzweig; H Brandstetter; D A Whittington; P Nordlund; S J Lippard; C A Frederick
Journal:  Proteins       Date:  1997-10

6.  Rational reprogramming of the R2 subunit of Escherichia coli ribonucleotide reductase into a self-hydroxylating monooxygenase.

Authors:  J Baldwin; W C Voegtli; N Khidekel; P Moënne-Loccoz; C Krebs; A S Pereira; B A Ley; B H Huynh; T M Loehr; P J Riggs-Gelasco; A C Rosenzweig; J M Bollinger
Journal:  J Am Chem Soc       Date:  2001-07-25       Impact factor: 15.419

7.  Dioxygen Activation and Methane Hydroxylation by Soluble Methane Monooxygenase: A Tale of Two Irons and Three Proteins A list of abbreviations can be found in Section 7.

Authors:  Maarten Merkx; Daniel A. Kopp; Matthew H. Sazinsky; Jessica L. Blazyk; Jens Müller; Stephen J. Lippard
Journal:  Angew Chem Int Ed Engl       Date:  2001-08-03       Impact factor: 15.336

Review 8.  Biochemistry of the soluble methane monooxygenase.

Authors:  J D Lipscomb
Journal:  Annu Rev Microbiol       Date:  1994       Impact factor: 15.500

9.  Oxidizing intermediates in cytochrome P450 model reactions.

Authors:  Wonwoo Nam; Yon Ok Ryu; Woon Ju Song
Journal:  J Biol Inorg Chem       Date:  2004-07-30       Impact factor: 3.358

10.  1H-15N heteronuclear NMR studies of Escherichia coli thioredoxin in samples isotopically labeled by residue type.

Authors:  D M LeMaster; F M Richards
Journal:  Biochemistry       Date:  1985-12-03       Impact factor: 3.162

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  11 in total

1.  Insights into the different dioxygen activation pathways of methane and toluene monooxygenase hydroxylases.

Authors:  Arteum D Bochevarov; Jianing Li; Woon Ju Song; Richard A Friesner; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2011-04-25       Impact factor: 15.419

2.  Structural consequences of effector protein complex formation in a diiron hydroxylase.

Authors:  Lucas J Bailey; Jason G McCoy; George N Phillips; Brian G Fox
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-25       Impact factor: 11.205

3.  Multiple roles of component proteins in bacterial multicomponent monooxygenases: phenol hydroxylase and toluene/o-xylene monooxygenase from Pseudomonas sp. OX1.

Authors:  Christine E Tinberg; Woon Ju Song; Viviana Izzo; Stephen J Lippard
Journal:  Biochemistry       Date:  2011-03-02       Impact factor: 3.162

4.  Tracking a defined route for O₂ migration in a dioxygen-activating diiron enzyme.

Authors:  Woon Ju Song; Grant Gucinski; Matthew H Sazinsky; Stephen J Lippard
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-22       Impact factor: 11.205

5.  Mechanistic studies of reactions of peroxodiiron(III) intermediates in T201 variants of toluene/o-xylene monooxygenase hydroxylase.

Authors:  Woon Ju Song; Stephen J Lippard
Journal:  Biochemistry       Date:  2011-05-19       Impact factor: 3.162

6.  Mössbauer, electron paramagnetic resonance, and density functional theory studies of synthetic S = 1/2 Fe(III)-O-Fe(IV)═O complexes. Superexchange-mediated spin transition at the Fe(IV)═O site.

Authors:  Raymond F De Hont; Genqiang Xue; Michael P Hendrich; Lawrence Que; Emile L Bominaar; Eckard Münck
Journal:  Inorg Chem       Date:  2010-09-20       Impact factor: 5.165

7.  Four-electron oxidation of p-hydroxylaminobenzoate to p-nitrobenzoate by a peroxodiferric complex in AurF from Streptomyces thioluteus.

Authors:  Ning Li; Victoria Korneeva Korboukh; Carsten Krebs; J Martin Bollinger
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-23       Impact factor: 11.205

8.  Molecular determinants of the regioselectivity of toluene/o-xylene monooxygenase from Pseudomonas sp. strain OX1.

Authors:  Eugenio Notomista; Valeria Cafaro; Giuseppe Bozza; Alberto Di Donato
Journal:  Appl Environ Microbiol       Date:  2008-12-12       Impact factor: 4.792

9.  Characterization of a peroxodiiron(III) intermediate in the T201S variant of toluene/o-xylene monooxygenase hydroxylase from Pseudomonas sp. OX1.

Authors:  Woon Ju Song; Rachel K Behan; Sunil G Naik; Boi Hanh Huynh; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2009-05-06       Impact factor: 15.419

10.  Characterization of the arene-oxidizing intermediate in ToMOH as a diiron(III) species.

Authors:  Leslie J Murray; Sunil G Naik; Danilo O Ortillo; Ricardo García-Serres; Jessica K Lee; Boi Hanh Huynh; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2007-10-30       Impact factor: 15.419

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